RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 LPLP06858 475 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 TM4SF4P48230 202 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 SEMA5AQ13591 1074 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 UGT8Q16880 541 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 PITRM1Q5JRX3 1037 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 HLA-DQA1Q5Y7H0 255 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 CCDC62Q6P9F0 684 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 CLEC4GQ6UXB4 293 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 CREG2Q8IUH2 290 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 FCRL2Q96LA5 508 aaPredicted RBP9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 HERPUD2Q9BSE4 406 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 APOL5Q9BWW9 433 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 TMEM60Q9H2L4 133 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 POLHQ9Y253 713 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 RWDD3Q9Y3V2 267 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 FANCD2Q9BXW9 1451 aa9.14□□□□□ -0.95
GAPVD1-217ENST00000479511 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 FAM90A27PA6NNH2 459 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 H3BML4 177 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 UBXN7O94888 489 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 ESR1P03372 595 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 C4BPAP04003 597 aaKnown RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 CENPBP07199 599 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 CD53P19397 219 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 COL8A1P27658 744 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 KRT72Q14CN4 511 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 KIAA0753Q2KHM9 967 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 ZBTB41Q5SVQ8 909 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 THAP5Q7Z6K1 395 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 KIAA0319LQ8IZA0 1049 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 THEMISQ8N1K5 641 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 FBXL6Q8N531 539 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 CAMKK1Q8N5S9 505 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 C1GALT1C1Q96EU7 318 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 SGCZQ96LD1 299 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 TBCBQ99426 244 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 C7orf69Q9H7B7 122 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 NGRNQ9NPE2 291 aaKnown RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 USP36Q9P275 1121 aaKnown RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 COA3Q9Y2R0 106 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 IPPQ9Y573 584 aa9.13□□□□□ -0.95
GAPVD1-217ENST00000479511 PRSS38A1L453 326 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 B3GALT2O43825 422 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 BUB1BO60566 1050 aaPredicted RBP9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 TYRP1P17643 537 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 SDHAP31040 664 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 IRX6P78412 446 aaPredicted RBP9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 EGR3Q06889 387 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 DENND1CQ8IV53 801 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 NLGN4XQ8N0W4 816 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 POF1BQ8WVV4 589 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 LRFN3Q9BTN0 628 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 B3GNT5Q9BYG0 378 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 POFUT1Q9H488 388 aa9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 MORC2Q9Y6X9 1032 aaPredicted RBP9.12□□□□□ -0.95
GAPVD1-217ENST00000479511 HMGB1P1B2RPK0 211 aaPredicted RBP9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 F5H423 210 aaPredicted RBP9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 FNTBP49356 437 aa9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 FAM193AP78312 1265 aa9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 MRPS9P82933 396 aaKnown RBP9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 TUBB8Q3ZCM7 444 aa9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 RIOX2Q8IUF8 465 aa9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 MFSD14AQ96MC6 490 aa9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
GAPVD1-217ENST00000479511 SYNJ2O15056 1496 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 FAM227AF5H4B4 570 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 SLC27A2O14975 620 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 ALDH2P05091 517 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 F13BP05160 661 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 PTPN1P18031 435 aaKnown RBP9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 EDNRBP24530 442 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 TUSC3Q13454 348 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 MUM1Q2TAK8 710 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 ARHGAP27Q6ZUM4 889 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 ESPNLQ6ZVH7 1005 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 KCTD1Q719H9 257 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 TSPEARQ8WU66 669 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 ATXN2LQ8WWM7 1075 aaKnown RBP9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 PGBD4Q96DM1 585 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 CCDC138Q96M89 665 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 TMPRSS11EQ9UL52 423 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 L1RE1Q9UN81 338 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 PEG3Q9GZU2 1588 aa9.1□□□□□ -0.95
GAPVD1-217ENST00000479511 FADS2P1A8MWK0 482 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 FOXP2O15409 715 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 CEACAM5P06731 702 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 PPM1FP49593 454 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 CLCN7P51798 805 aa9.09□□□□□ -0.95
GAPVD1-217ENST00000479511 EPHA5P54756 1037 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms