RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 MYBL1P10243 752 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 TMOD1P28289 359 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 XRCC4Q13426 336 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 NFIXQ14938 502 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 ANKRD20A8PQ5CZ79 823 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 C6orf89Q6UWU4 347 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 RNF10Q8N5U6 811 aaKnown RBP12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 MYCBPAPQ8TBZ2 947 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 MIPOL1Q8TD10 442 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZNF570Q96NI8 536 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 MTMR9Q96QG7 549 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 TRIM31Q9BZY9 425 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 DDX47Q9H0S4 455 aaKnown RBP12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 DNAAF2Q9NVR5 837 aaKnown RBP12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 CEP72Q9P209 647 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZFATQ9P243 1243 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 GRID2IPA4D2P6 1211 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 BTDP43251 543 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 PICALMQ13492 652 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 NAB2Q15742 525 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 SLC18A3Q16572 532 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 ZFAND2BQ8WV99 257 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 ANKS1AQ92625 1134 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 IQCDQ96DY2 449 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 RAB34Q9BZG1 259 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 LUC7LQ9NQ29 371 aaKnown RBP12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 STK17AQ9UEE5 414 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 KIAA1024Q9UPX6 916 aa12.02□□□□□ -0.49
LRRFIP1-211ENST00000478958 SLC16A2P36021 539 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 MAGEA10P43363 369 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 SCTRP47872 440 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ADCY7P51828 1080 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ELF3P78545 371 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ADAM9Q13443 819 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 RPS6KA1Q15418 735 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 PTGISQ16647 500 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 GLE1Q53GS7 698 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 UBLCP1Q8WVY7 318 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ATP6V1G3Q96LB4 118 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 NOP53Q9NZM5 478 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 A6NHS1 94 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ALDH1B1P30837 517 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 CTNNA1P35221 906 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 PTK2Q05397 1052 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 SFSWAPQ12872 951 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ASIC2Q16515 512 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 MEI1Q5TIA1 1274 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 HIBCHQ6NVY1 386 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 CRELD2Q6UXH1 353 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ADAT2Q7Z6V5 191 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ATL2Q8NHH9 583 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 INPP4AQ96PE3 977 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 FAM167BQ9BTA0 163 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 ANKRD2Q9GZV1 360 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 RANBP17Q9H2T7 1088 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 L3MBTL1Q9Y468 752 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 EDIL3O43854 480 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 LUC7L3O95232 432 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 SLC9A1P19634 815 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 MDH1P40925 334 aaKnown RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 TNNC1P63316 161 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 RASA3Q14644 834 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 DCAF17Q5H9S7 520 aaPredicted RBP12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 KDM7AQ6ZMT4 941 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 SYCP3Q8IZU3 236 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP38Q8NB14 1042 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 CCHCR1Q8TD31 782 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 SLX1AQ9BQ83 275 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 OSBPL7Q9BZF2 842 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 RIC8AQ9NPQ8 531 aa12.01□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTEB3A0JP26 581 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTECB2RU33 542 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 DIAPH2O60879 1101 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 FAM107AO95990 144 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 FLT3P36888 993 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 STAT3P40763 770 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 MXRA7P84157 204 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 PPP1R7Q15435 360 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTEBQ6S5H4 581 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 DNAJC19Q96DA6 116 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 OSBPL1AQ9BXW6 950 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 DPH5Q9H2P9 285 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 AMACRQ9UHK6 382 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 DDX25Q9UHL0 483 aaKnown RBP12□□□□□ -0.49
LRRFIP1-211ENST00000478958 PCDHA12Q9UN75 941 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 A0A1B0GUL6 1792 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
LRRFIP1-211ENST00000478958 MYZAPP0CAP1 466 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 SLURP2P0DP57 97 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms