RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 PDE6AP16499 860 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 NAT1P18440 290 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 MRE11P49959 708 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 EIF4HQ15056 248 aaKnown RBP5.1□□□□□ -1.59
VLDLR-204ENST00000478776 PCOLCEQ15113 449 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 TBR1Q16650 682 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 YOD1Q5VVQ6 348 aaPredicted RBP5.1□□□□□ -1.59
VLDLR-204ENST00000478776 LARP4Q71RC2 724 aaKnown RBP eCLIP5.1□□□□□ -1.59
VLDLR-204ENST00000478776 ASXL2Q76L83 1435 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 MAMDC2Q7Z304 686 aaPredicted RBP5.1□□□□□ -1.59
VLDLR-204ENST00000478776 ADGRE4PQ86SQ3 457 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 OSTM1Q86WC4 334 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 PTRH1Q86Y79 214 aaKnown RBP5.1□□□□□ -1.59
VLDLR-204ENST00000478776 WNK4Q96J92 1243 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 BTBD2Q9BX70 525 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 TRIM55Q9BYV6 548 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 PARPBPQ9NWS1 579 aa5.1□□□□□ -1.59
VLDLR-204ENST00000478776 A0A0G2JNJ9 132 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 CAPN14A8MX76 684 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 SRGAP2CP0DJJ0 459 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 GUCY1A3Q02108 690 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 DUSP8Q13202 625 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 CRHR2Q13324 411 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 FAM47CQ5HY64 1035 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 FIGNQ5HY92 759 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 SCUBE1Q8IWY4 988 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 OR14K1Q8NGZ2 314 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 PTPRN2Q92932 1015 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 ZG16BQ96DA0 208 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 Q9UFV3 132 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 PCDHA8Q9Y5H6 950 aa5.09□□□□□ -1.59
VLDLR-204ENST00000478776 MAN2B1O00754 1011 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 U2SURPO15042 1029 aaKnown RBP5.08□□□□□ -1.6
VLDLR-204ENST00000478776 PYGMP11217 842 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 AOAHP28039 575 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 ECE1P42892 770 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 NANOS3P60323 173 aaKnown RBP5.08□□□□□ -1.6
VLDLR-204ENST00000478776 HERVK_113P62684 666 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 CD83Q01151 205 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 C16orf59Q7L2K0 433 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 MRGPRGQ86SM5 289 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 ZNF575Q86XF7 245 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 CFHR4Q92496 578 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 TMEM176AQ96HP8 235 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 CRAMP1Q96RY5 1269 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 UCKL1Q9NWZ5 548 aa5.08□□□□□ -1.6
VLDLR-204ENST00000478776 CCDC85CA6NKD9 419 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 WNT9AO14904 365 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 SLC26A4O43511 780 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 AMY2AP04746 511 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 AMY2BP19961 511 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 MC4RP32245 332 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 DNM2P50570 870 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 JAM2P57087 298 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 SERINC3Q13530 473 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 STILQ15468 1287 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 NBPF6Q5VWK0 638 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 TRIM68Q6AZZ1 485 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 SHCBP1Q8NEM2 672 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 PCDH19Q8TAB3 1148 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 LARP4BQ92615 738 aaKnown RBP5.07□□□□□ -1.6
VLDLR-204ENST00000478776 CLIP3Q96DZ5 547 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 NBPF4Q96M43 638 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 SPATA9Q9BWV2 254 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 OR10A5Q9H207 317 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 ZNF703Q9H7S9 590 aaPredicted RBP5.07□□□□□ -1.6
VLDLR-204ENST00000478776 SIRPGQ9P1W8 387 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 MSRB2Q9Y3D2 182 aa5.07□□□□□ -1.6
VLDLR-204ENST00000478776 TRBV23-1A0A0A0MS06 115 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 RAMP2O60895 175 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 CLASP2O75122 1294 aaKnown RBP5.06□□□□□ -1.6
VLDLR-204ENST00000478776 C4BPAP04003 597 aaKnown RBP5.06□□□□□ -1.6
VLDLR-204ENST00000478776 SUMO1P63165 101 aaKnown RBP5.06□□□□□ -1.6
VLDLR-204ENST00000478776 MOGSQ13724 837 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 SOGA3Q5TF21 947 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 FNDC7Q5VTL7 733 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 GRAMD4Q6IC98 578 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 ZC3H7AQ8IWR0 971 aaKnown RBP5.06□□□□□ -1.6
VLDLR-204ENST00000478776 GPR135Q8IZ08 494 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 HIPK4Q8NE63 616 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 UBXN4Q92575 508 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 ZNF669Q96BR6 464 aaPredicted RBP5.06□□□□□ -1.6
VLDLR-204ENST00000478776 BTBD7Q9P203 1132 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 USP35Q9P2H5 1018 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 CBLCQ9ULV8 474 aa5.06□□□□□ -1.6
VLDLR-204ENST00000478776 CCDC66A2RUB6 948 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 FAM221BA6H8Z2 402 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 KCNK3O14649 394 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 TGM1P22735 817 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 TMEM200BQ69YZ2 307 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 LRSAM1Q6UWE0 723 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 LDLRAD3Q86YD5 345 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 TMPRSS6Q8IU80 811 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 ANKRD35Q8N283 1001 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 CALML6Q8TD86 181 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 MPHOSPH9Q99550 1183 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 PRRX2Q99811 253 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 AMNQ9BXJ7 453 aa5.05□□□□□ -1.6
VLDLR-204ENST00000478776 CCDC113Q9H0I3 377 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms