RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 WNT10BO00744 389 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 EPB41P11171 864 aaKnown RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 TAL1P17542 331 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 MMGT1Q8N4V1 131 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 PARVGQ9HBI0 331 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 RNF14Q9UBS8 474 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 TFR2Q9UP52 801 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 LYPLA2O95372 231 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 FDX1P10109 184 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 XRCC5P13010 732 aaKnown RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 EPS15P42566 896 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 MCCD1P59942 119 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 POLR2FP61218 127 aaKnown RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 NOA1Q8NC60 698 aaKnown RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 GOLGA5Q8TBA6 731 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 TBC1D5Q92609 795 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 MMS19Q96T76 1030 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 ZNF577Q9BSK1 485 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 MAF1Q9H063 256 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 TAF1DQ9H5J8 278 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 MYOZ2Q9NPC6 264 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 RGL1Q9NZL6 768 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 HDAC6Q9UBN7 1215 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-212ENST00000477970 DUSP10Q9Y6W6 482 aa13.41□□□□□ -0.26
PTPRF-212ENST00000477970 LOC285556D6RIA3 1793 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 ENC1O14682 589 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 TGFB1I1O43294 461 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 CYP4A11Q02928 519 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 ALCAMQ13740 583 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 PNMA8AQ86V59 439 aaPredicted RBP13.4□□□□□ -0.26
PTPRF-212ENST00000477970 SLC9A9Q8IVB4 645 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
PTPRF-212ENST00000477970 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
PTPRF-212ENST00000477970 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 UNC45AQ9H3U1 944 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 ZSWIM4Q9H7M6 989 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 DMAC2Q9NW81 257 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 NENFQ9UMX5 172 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 HYOU1Q9Y4L1 999 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 CAPN6Q9Y6Q1 641 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 AKAP3O75969 853 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 FAM13AO94988 1023 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 NAB2Q15742 525 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 ASIC2Q16515 512 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 PCNX4Q63HM2 1172 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 CREG2Q8IUH2 290 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 TEPSINQ96N21 525 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 VIPAS39Q9H9C1 493 aa13.4□□□□□ -0.26
PTPRF-212ENST00000477970 DBR1Q9UK59 544 aaKnown RBP13.4□□□□□ -0.26
PTPRF-212ENST00000477970 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 RSPH10B2B2RC85 870 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 GFPT2O94808 682 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
PTPRF-212ENST00000477970 GCNT3O95395 438 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 RSPH10BP0C881 870 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 JAM2P57087 298 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 RAD51AP2Q09MP3 1159 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
PTPRF-212ENST00000477970 USP50Q70EL3 339 aaPredicted RBP13.39□□□□□ -0.27
PTPRF-212ENST00000477970 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 SLC35C1Q96A29 364 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 TIPINQ9BVW5 301 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 ZHX3Q9H4I2 956 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 UBIAD1Q9Y5Z9 338 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 PPP1R37O75864 691 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 PON1P27169 355 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 VSNL1P62760 191 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
PTPRF-212ENST00000477970 GBP6Q6ZN66 633 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 ZNF720Q7Z2F6 126 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 MYH11P35749 1972 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
PTPRF-212ENST00000477970 CES2O00748 559 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 PSMC2P35998 433 aaKnown RBP13.39□□□□□ -0.27
PTPRF-212ENST00000477970 PPP2R5AQ15172 486 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 EXOC3L4Q17RC7 722 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 IRF2BP2Q7Z5L9 587 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 TPH2Q8IWU9 490 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
PTPRF-212ENST00000477970 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 ARP10275 920 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 UCHL3P15374 230 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 MAP9Q49MG5 647 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 NLRC4Q9NPP4 1024 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 MOCS3O95396 460 aa13.38□□□□□ -0.27
PTPRF-212ENST00000477970 TFRCP02786 760 aaKnown RBP13.38□□□□□ -0.27
PTPRF-212ENST00000477970 EPHX2P34913 555 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms