RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 CCDC85BQ15834 202 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-205ENST00000477893 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 SWSAP1Q6NVH7 229 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 MIS18BP1Q6P0N0 1132 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 CKAP2LQ8IYA6 745 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 MYOCDQ8IZQ8 938 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 BLIDQ8IZY5 108 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 TET1Q8NFU7 2136 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 CRYGNQ8WXF5 182 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 ARNTL2Q8WYA1 636 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 ZNF302Q9NR11 478 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 SH3GLB2Q9NR46 395 aa9.39□□□□□ -0.91
ERCC8-205ENST00000477893 KIF28PB7ZC32 967 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 MSH4O15457 936 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 JAK2O60674 1132 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 GAS7O60861 476 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 PARNO95453 639 aaKnown RBP9.38□□□□□ -0.91
ERCC8-205ENST00000477893 CTDNEP1O95476 244 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 ADAM17P78536 824 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 ADGRE1Q14246 886 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 ANKRD1Q15327 319 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 ME3Q16798 604 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 INF2Q27J81 1249 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 MARCH8Q5T0T0 291 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 MCTP2Q6DN12 878 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 TAF2Q6P1X5 1199 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 NIPA1Q7RTP0 329 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 RSPH3Q86UC2 560 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 TEX2Q8IWB9 1127 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 USP38Q8NB14 1042 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 SEPT8Q92599 483 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 LENG9Q96B70 501 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 ORC3Q9UBD5 711 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-205ENST00000477893 GABBR1Q9UBS5 961 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 GINS2Q9Y248 185 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 CDY2AQ9Y6F7 541 aa9.38□□□□□ -0.91
ERCC8-205ENST00000477893 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 CCDC194A0A1B0GVG4 234 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 ABHD14A-ACY1A0A1B0GW23 586 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 EPOPA6NHQ4 379 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 DHX15O43143 795 aaKnown RBP9.37□□□□□ -0.91
ERCC8-205ENST00000477893 CAND2O75155 1236 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 CHRNA1P02708 482 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 AMHP03971 560 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 MRPS6P82932 125 aaKnown RBP9.37□□□□□ -0.91
ERCC8-205ENST00000477893 KRT76Q01546 638 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 TAP1Q03518 808 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 NONOQ15233 471 aaKnown RBP eCLIP9.37□□□□□ -0.91
ERCC8-205ENST00000477893 NPY5RQ15761 445 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 LETM2Q2VYF4 491 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 PLEKHG4Q58EX7 1191 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 PIK3AP1Q6ZUJ8 805 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 PLPPR4Q7Z2D5 763 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
ERCC8-205ENST00000477893 PHOSPHO2Q8TCD6 241 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 GDPD5Q8WTR4 605 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 TEKT3Q9BXF9 490 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 IFIH1Q9BYX4 1025 aaKnown RBP9.37□□□□□ -0.91
ERCC8-205ENST00000477893 UNC45AQ9H3U1 944 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 TBC1D22BQ9NU19 505 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 UNC80Q8N2C7 3258 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 PTPRSQ13332 1948 aa9.37□□□□□ -0.91
ERCC8-205ENST00000477893 CHD7Q9P2D1 2997 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 MBLAC1A4D2B0 266 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-205ENST00000477893 RRN3P2A6NIE6 340 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 WDR64B1ANS9 1081 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 M0QZ92 97 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 SLC37A4O43826 429 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 EDIL3O43854 480 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 EFCAB14O75071 495 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 GJB5O95377 273 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 PSAPP07602 524 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 XBP1P17861 261 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 ATP4AP20648 1035 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 CD52P31358 61 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 CIITAP33076 1130 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 MGAT3Q09327 533 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 LPIN1Q14693 890 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 UGCGQ16739 394 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 TMEM266Q2M3C6 531 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 KRT40Q6A162 431 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 ZNF746Q6NUN9 644 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-205ENST00000477893 MTHFD1LQ6UB35 978 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 METTL13Q8N6R0 699 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 YME1L1Q96TA2 773 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 PHF20Q9BVI0 1012 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 PRDM6Q9NQX0 595 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 DISC1Q9NRI5 854 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
ERCC8-205ENST00000477893 PCDHA10Q9Y5I2 948 aa9.36□□□□□ -0.91
ERCC8-205ENST00000477893 IGKV6D-21A0A0A0MT36 114 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms