RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 TMEM82A0PJX8 343 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 TBX1O43435 398 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 RPL10P27635 214 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 ZNF143P52747 638 aaPredicted RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 PCBP3P57721 371 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 ZNF792Q3KQV3 632 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 SLC23A3Q6PIS1 610 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 LMBR1LQ6UX01 489 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 RNF111Q6ZNA4 994 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 TMEM57Q8N5G2 664 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 AGBL5Q8NDL9 886 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 BVESQ8NE79 360 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 CDC5LQ99459 802 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 SLC12A9Q9BXP2 914 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 BICC1Q9H694 974 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 C9orf78Q9NZ63 289 aaPredicted RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 EBF1Q9UH73 591 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 ZNF281Q9Y2X9 895 aa6.5□□□□□ -1.37
VPS45-207ENST00000477558 SF3B6Q9Y3B4 125 aaKnown RBP6.5□□□□□ -1.37
VPS45-207ENST00000477558 ARID1BQ8NFD5 2236 aaPredicted RBP6.49□□□□□ -1.37
VPS45-207ENST00000477558 MED23Q9ULK4 1368 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 FZD9O00144 591 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 PDPK1O15530 556 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 ITGAVP06756 1048 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 YY1P25490 414 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 BMP8BP34820 402 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 IARSP41252 1262 aaKnown RBP6.49□□□□□ -1.37
VPS45-207ENST00000477558 GPSM2P81274 684 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 KIAA2012Q0VF49 1180 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 DPY19L1Q2PZI1 675 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 SLC10A6Q3KNW5 377 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 CCDC144BQ3MJ40 725 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 CWF19L1Q69YN2 538 aaKnown RBP6.49□□□□□ -1.37
VPS45-207ENST00000477558 C15orf52Q6ZUT6 534 aaKnown RBP6.49□□□□□ -1.37
VPS45-207ENST00000477558 ANKRD18AQ8IVF6 992 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 VGLL2Q8N8G2 317 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 TBC1D16Q8TBP0 767 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 FCRL3Q96P31 734 aaPredicted RBP6.49□□□□□ -1.37
VPS45-207ENST00000477558 ALPK1Q96QP1 1244 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 CCDC113Q9H0I3 377 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 OSBPL2Q9H1P3 480 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 ZNF277Q9NRM2 450 aaPredicted RBP6.49□□□□□ -1.37
VPS45-207ENST00000477558 RNF181Q9P0P0 153 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 EMC9Q9Y3B6 208 aa6.49□□□□□ -1.37
VPS45-207ENST00000477558 XDHP47989 1333 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 ANKRD18BA2A2Z9 1011 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 ZNF205O95201 554 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 KCNH1O95259 989 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 GNAI3P08754 354 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 UBTFL1P0CB47 393 aaPredicted RBP6.48□□□□□ -1.37
VPS45-207ENST00000477558 NAT2P11245 290 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 IFIT5Q13325 482 aaKnown RBP6.48□□□□□ -1.37
VPS45-207ENST00000477558 RASA3Q14644 834 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 RTP2Q5QGT7 225 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 SPATC1Q76KD6 591 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 DPH6Q7L8W6 267 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 FRAT1Q92837 279 aaPredicted RBP6.48□□□□□ -1.37
VPS45-207ENST00000477558 MRGPRX3Q96LB0 322 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 AP5S1Q9NUS5 200 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 C19orf73Q9NVV2 129 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 LRP2BPQ9P2M1 347 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 POLLQ9UGP5 575 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 RIPOR2Q9Y4F9 1068 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 RNF114Q9Y508 228 aa6.48□□□□□ -1.37
VPS45-207ENST00000477558 ZNF541Q9H0D2 1346 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 MYH13Q9UKX3 1938 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 GLTPD2A6NH11 291 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 NOP56O00567 594 aaKnown RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 IGSF3O75054 1194 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 CD3EP07766 207 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 GSTM1P09488 218 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 IFNGR1P15260 489 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 IGHMBP2P38935 993 aaKnown RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 MVPQ14764 893 aaKnown RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 DPP8Q6V1X1 898 aaPredicted RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 SUPT20HQ8NEM7 779 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 DEPDC7Q96QD5 511 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 PFDN2Q9UHV9 154 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 HDAC5Q9UQL6 1122 aa6.47□□□□□ -1.37
VPS45-207ENST00000477558 GPR55Q9Y2T6 319 aaPredicted RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 LRRFIP2Q9Y608 721 aaKnown RBP6.47□□□□□ -1.37
VPS45-207ENST00000477558 A0A1W2PQU0 124 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 YDJCA8MPS7 323 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 CIAO1O76071 339 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ZGLP1P0C6A0 271 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 GRIA2P42262 883 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 NOP2P46087 812 aaKnown RBP6.46□□□□□ -1.38
VPS45-207ENST00000477558 HK2P52789 917 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ERVFC1P60507 584 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 POU4F1Q01851 419 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 CHRNDQ07001 517 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 RASGRF1Q13972 1273 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
VPS45-207ENST00000477558 CCDC57Q2TAC2 916 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 C20orf194Q5TEA3 1177 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 GTF2IRD2BQ6EKJ0 949 aa6.46□□□□□ -1.38
VPS45-207ENST00000477558 ATG9AQ7Z3C6 839 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms