RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 SLITRK6Q9H5Y7 841 aa4.59□□□□□ -1.67
NPHP3-207ENST00000476742 UCKL1Q9NWZ5 548 aa4.59□□□□□ -1.67
NPHP3-207ENST00000476742 BTBD7Q9P203 1132 aa4.59□□□□□ -1.67
NPHP3-207ENST00000476742 MAPRE3Q9UPY8 281 aa4.59□□□□□ -1.67
NPHP3-207ENST00000476742 GOLGA6L22H0YM25 854 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 IL18BPO95998 194 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 KNG1P01042 644 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 TGM1P22735 817 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 MC4RP32245 332 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 ECE1P42892 770 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 PCBP1Q15365 356 aaKnown RBP eCLIP4.58□□□□□ -1.68
NPHP3-207ENST00000476742 WDR72Q3MJ13 1102 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 CXXC5Q7LFL8 322 aaKnown RBP4.58□□□□□ -1.68
NPHP3-207ENST00000476742 ZDHHC14Q8IZN3 488 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 NXPE1Q8N323 547 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 KLHL36Q8N4N3 616 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 SYT8Q8NBV8 401 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 LEO1Q8WVC0 666 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-207ENST00000476742 ZCCHC14Q8WYQ9 949 aaKnown RBP4.58□□□□□ -1.68
NPHP3-207ENST00000476742 YTHDC1Q96MU7 727 aaKnown RBP4.58□□□□□ -1.68
NPHP3-207ENST00000476742 BTBD2Q9BX70 525 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 SPO11Q9Y5K1 396 aa4.58□□□□□ -1.68
NPHP3-207ENST00000476742 A0A087X0B3 334 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 OTOL1A6NHN0 477 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-207ENST00000476742 RASSF10A6NK89 507 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 ZNF891A8MT65 544 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-207ENST00000476742 GSG1L2A8MUP6 293 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 DVL2O14641 736 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 NOBOXO60393 691 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 ATP2A2P16615 1042 aaKnown RBP4.57□□□□□ -1.68
NPHP3-207ENST00000476742 SLC9A1P19634 815 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 SOX5P35711 763 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 KPNA1P52294 538 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-207ENST00000476742 IL2P60568 153 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 DSG1Q02413 1049 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 ROM1Q03395 351 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 CATSPEREQ5SY80 951 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 DDX46Q7L014 1031 aaKnown RBP4.57□□□□□ -1.68
NPHP3-207ENST00000476742 FRMD5Q7Z6J6 570 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 C11orf74Q86VG3 221 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 ZZZ3Q8IYH5 903 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 IFNL2Q8IZJ0 200 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 LGI4Q8N135 537 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 EFHBQ8N7U6 833 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 XYLT2Q9H1B5 865 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 TOMM22Q9NS69 142 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 OXSMQ9NWU1 459 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 THG1LQ9NWX6 298 aaKnown RBP4.57□□□□□ -1.68
NPHP3-207ENST00000476742 FBXO10Q9UK96 956 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 ZDHHC9Q9Y397 364 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 PRKAB1Q9Y478 270 aa4.57□□□□□ -1.68
NPHP3-207ENST00000476742 UBA6A0AVT1 1052 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-207ENST00000476742 FAM83GA6ND36 823 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 CUTAO60888 179 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 KLHL18O94889 574 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 MPIG6BO95866 241 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 COL6A1P12109 1028 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 APEX1P27695 318 aaKnown RBP4.56□□□□□ -1.68
NPHP3-207ENST00000476742 POLD1P28340 1107 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 IL13RA1P78552 427 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 ADCY1Q08828 1119 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 MAP3K12Q12852 859 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 NFATC3Q12968 1075 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 EPHA7Q15375 998 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 CT47A1Q5JQC4 288 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-207ENST00000476742 EGFLAMQ63HQ2 1017 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 OTOP2Q7RTS6 562 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 PLEKHH3Q7Z736 793 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 REXO1L1PQ8IX06 675 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 SMC1BQ8NDV3 1235 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 NUDT10Q8NFP7 164 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 CHAC2Q8WUX2 184 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 CHTF18Q8WVB6 975 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 USP7Q93009 1102 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 NUDT11Q96G61 164 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 NAF1Q96HR8 494 aaKnown RBP4.56□□□□□ -1.68
NPHP3-207ENST00000476742 FOXB1Q99853 325 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 AMNQ9BXJ7 453 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 OR10A5Q9H207 317 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 CAAP1Q9H8G2 361 aa4.56□□□□□ -1.68
NPHP3-207ENST00000476742 MAFGO15525 162 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 CPEP16870 476 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 TNFRSF1AP19438 455 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 CD40P25942 277 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 PTX3P26022 381 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-207ENST00000476742 LSSP48449 732 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 MASP1P48740 699 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 ALDH6A1Q02252 535 aaKnown RBP4.55□□□□□ -1.68
NPHP3-207ENST00000476742 DHCR24Q15392 516 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 STILQ15468 1287 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 SURF1Q15526 300 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 SEPT7Q16181 437 aaKnown RBP4.55□□□□□ -1.68
NPHP3-207ENST00000476742 TTC38Q5R3I4 469 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 UBXN11Q5T124 520 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 TIGD7Q6NT04 549 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-207ENST00000476742 LRSAM1Q6UWE0 723 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 Q6ZUG5 572 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 RTN4RL1Q86UN2 441 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-207ENST00000476742 THNSL2Q86YJ6 484 aa4.55□□□□□ -1.68
NPHP3-207ENST00000476742 PHYKPLQ8IUZ5 450 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms