RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	GLRX3	O76003	335 aa	Known RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	CYP1A1	P04798	512 aa	Predicted RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	TPM2	P07951	284 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	NAT2	P11245	290 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	C6	P13671	934 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	HOXC9	P31274	260 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	CEBPA	P49715	358 aa	Predicted RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	NEXN	Q0ZGT2	675 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	KRT24	Q2M2I5	525 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	ZSCAN23	Q3MJ62	389 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	HS1BP3	Q53T59	392 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	UNC5A	Q6ZN44	842 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	KY	Q8NBH2	561 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	LCOR	Q96JN0	433 aa	Predicted RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	SORCS2	Q96PQ0	1159 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	TSPY26P	Q9H489	355 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	PHAX	Q9H814	394 aa	Known RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	RXFP1	Q9HBX9	757 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	JADE2	Q9NQC1	790 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	STAP2	Q9UGK3	403 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	SMC3	Q9UQE7	1217 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	LRRFIP2	Q9Y608	721 aa	Known RBP	4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	CRB1	P82279	1406 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	SSH2	Q76I76	1423 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	IGSF1	Q8N6C5	1336 aa		4.96	□□□□□ -1.62
RBM39-229	ENST00000475651	GOLGA6L4	A6NEF3	574 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	C2orf71	A6NGG8	1288 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	CYR61	O00622	381 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	AURKA	O14965	403 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ACR	P10323	421 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	TACR2	P21452	398 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	CHML	P26374	656 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	PSMA5	P28066	241 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	MCM5	P33992	734 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	COL9A2	Q14055	689 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ANKRD1	Q15327	319 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	PRAMEF18	Q5VWM3	479 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	POMZP3	Q6PJE2	187 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	CD300LD	Q6UXZ3	194 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	NOL8	Q76FK4	1167 aa	Known RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	G2E3	Q7L622	706 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ZSCAN30	Q86W11	494 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	FAM184A	Q8NB25	1140 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	TMEM87A	Q8NBN3	555 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ADCY4	Q8NFM4	1077 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	DNAAF4	Q8WXU2	420 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	CHMP4C	Q96CF2	233 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	TMX3	Q96JJ7	454 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	SPATA32	Q96LK8	384 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	HAUS7	Q99871	368 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	PANK2	Q9BZ23	570 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	DEF6	Q9H4E7	631 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	DBF4	Q9UBU7	674 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ZNF214	Q9UL59	606 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	INVS	Q9Y283	1065 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	CPS1	P31327	1500 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	OVOS2	A0A0J9YW53	1432 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	OVOS2	Q6IE36	1432 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	ANKAR	Q7Z5J8	1434 aa		4.95	□□□□□ -1.62
RBM39-229	ENST00000475651	GOLGA6L6	A8MZA4	724 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	FZD7	O75084	574 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	ALDH1L1	O75891	902 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	FUCA1	P04066	466 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	PDC	P20941	246 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	THBS2	P35442	1172 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	SLC7A5	Q01650	507 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	DLX2	Q07687	328 aa	Predicted RBP	4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	GRB10	Q13322	594 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	DPY19L1	Q2PZI1	675 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	LRSAM1	Q6UWE0	723 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	PPP1R42	Q7Z4L9	355 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	PPFIBP1	Q86W92	1011 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	LINC00482	Q8N8I6	264 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	IP6K1	Q92551	441 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	NOX5	Q96PH1	765 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	WRNIP1	Q96S55	665 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	PPP1R9B	Q96SB3	815 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.94	□□□□□ -1.62	1e-10	■□□□□ 8.5
RBM39-229	ENST00000475651	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	BCAS3	Q9H6U6	928 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	IL1RAPL2	Q9NP60	686 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	RRAGD	Q9NQL2	400 aa	Predicted RBP	4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	LMBRD1	Q9NUN5	540 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	HYPK	Q9NX55	129 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	GULP1	Q9UBP9	304 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	LIMCH1	Q9UPQ0	1083 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	CYP46A1	Q9Y6A2	500 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	DIP2B	Q9P265	1576 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	TTC41P	Q6P2S7	1318 aa		4.94	□□□□□ -1.62
RBM39-229	ENST00000475651	KDR	P35968	1356 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	NPEPPSL1	A6NEC2	478 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	C9orf118	A6NHY6	69 aa		4.93	□□□□□ -1.62
RBM39-229	ENST00000475651	LAMTOR5	O43504	91 aa		4.93	□□□□□ -1.62

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