RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SLITRK3O94933 977 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 CSF2RAP15509 400 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 MARCKSP29966 332 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 CDC25AP30304 524 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 PRPHP41219 470 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 TECP42680 631 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 FXR2P51116 673 aaKnown RBP eCLIP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 ADAM17P78536 824 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 ZNF200P98182 395 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 FAAP100Q0VG06 881 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 ITGA7Q13683 1181 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 MFSD10Q14728 455 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 SLC39A14Q15043 492 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 PLCB4Q15147 1175 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 ECM1Q16610 540 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 KIAA0753Q2KHM9 967 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 MARCH8Q5T0T0 291 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 SWSAP1Q6NVH7 229 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 USP49Q70CQ1 688 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 PLPPR4Q7Z2D5 763 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 MIER3Q7Z3K6 550 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 SMAP1Q8IYB5 467 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 SLFN12Q8IYM2 578 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 LINC00301Q8NCQ3 95 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 AFAP1L1Q8TED9 768 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 LRRC15Q8TF66 581 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 ZBTB10Q96DT7 871 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 IPO9Q96P70 1041 aaKnown RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 CEP89Q96ST8 783 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 TUT1Q9H6E5 874 aaKnown RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 STARD7Q9NQZ5 370 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 POLR3EQ9NVU0 708 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 GABBR1Q9UBS5 961 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 DAXXQ9UER7 740 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 FBXO2Q9UK22 296 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 MORC2Q9Y6X9 1032 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-204ENST00000474665 ARID2Q68CP9 1835 aa7.86□□□□□ -1.15
LIMD1-204ENST00000474665 SCN5AQ14524 2016 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 A0A0U1RQG5 324 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 POTEB3A0JP26 581 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 EPOPA6NHQ4 379 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ARVCFO00192 962 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 DCXO43602 365 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 GTPBP6O43824 516 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ZEB2O60315 1214 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 MED24O75448 989 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 CABYRO75952 493 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 TIMP1P01033 207 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 CD4P01730 458 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 PSAPP07602 524 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 SMIM10L2AP0DMW4 78 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 SMIM10L2BP0DMW5 78 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 POU3F3P20264 500 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 MARK3P27448 753 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 SFNP31947 248 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 STAT5BP51692 787 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 JAK3P52333 1124 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 PTPN5P54829 565 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 PPIGQ13427 754 aaKnown RBP eCLIP7.85□□□□□ -1.155e-7■■□□□ 11.9
LIMD1-204ENST00000474665 EPHA7Q15375 998 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 BRDTQ58F21 947 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ARL6IP4Q66PJ3 421 aaKnown RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 NCAPH2Q6IBW4 605 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 GDF6Q6KF10 455 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 MFSD5Q6N075 450 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 MIS18BP1Q6P0N0 1132 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 POTEBQ6S5H4 581 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ANKRD33Q7Z3H0 272 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 SESTD1Q86VW0 696 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 FAM126BQ8IXS8 530 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ZNF579Q8NAF0 562 aaKnown RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 BANK1Q8NDB2 785 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 RDM1Q8NG50 284 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 TRAPPC12Q8WVT3 735 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 GLG1Q92896 1179 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 WNT8BQ93098 351 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 MFSD14AQ96MC6 490 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 GLT1D1Q96MS3 346 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 EIF2AK1Q9BQI3 630 aaKnown RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 TRPV6Q9H1D0 765 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 SMARCAD1Q9H4L7 1026 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ZNF302Q9NR11 478 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 TRMT13Q9NUP7 481 aaKnown RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 SETD4Q9NVD3 440 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 HDAC6Q9UBN7 1215 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 RCOR1Q9UKL0 485 aa7.85□□□□□ -1.15
LIMD1-204ENST00000474665 CIZ1Q9ULV3 898 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-204ENST00000474665 ZNF318Q5VUA4 2279 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 VWA3AA6NCI4 1184 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 LAD1O00515 517 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 BACH1O14867 736 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 B4GALT4O60513 344 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 BAG4O95429 457 aaKnown RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 INSRRP14616 1297 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 IL9P15248 144 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 ID4P47928 161 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms