RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 NT5C3AQ9H0P0 336 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 SPC25Q9HBM1 224 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 ANKEF1Q9NU02 776 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 DACT1Q9NYF0 836 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 OGDHLQ9ULD0 1010 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 DNM3Q9UQ16 869 aa11.19□□□□□ -0.62
COL8A1-206ENST00000474648 ZBTB42B2RXF5 422 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 H3BRB1 525 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 DKC1O60832 514 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 EYA4O95677 639 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 F2P00734 622 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 OATP04181 439 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 GJB1P08034 283 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 PLA2G4BP0C869 781 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 MARK3P27448 753 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 YWHABP31946 246 aaKnown RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 STAT6P42226 847 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 SLC26A2P50443 739 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 NPEPPSP55786 919 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 PRKCEQ02156 737 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 MCM6Q14566 821 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 CXCL17Q6UXB2 119 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 KRBA2Q6ZNG9 492 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 RNF180Q86T96 592 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 SYT2Q8N9I0 419 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 CDK5RAP3Q96JB5 506 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 TIGD1Q96MW7 591 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 TSEN34Q9BSV6 310 aaKnown RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 MTG1Q9BT17 334 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 TUT1Q9H6E5 874 aaKnown RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 NRBP2Q9NSY0 501 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 KBTBD4Q9NVX7 518 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 ERAP1Q9NZ08 941 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 STK17AQ9UEE5 414 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 USP25Q9UHP3 1055 aa11.18□□□□□ -0.62
COL8A1-206ENST00000474648 DBR1Q9UK59 544 aaKnown RBP11.18□□□□□ -0.62
COL8A1-206ENST00000474648 ZEB2O60315 1214 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 SGPL1O95470 568 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 ASGR1P07306 291 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 PTMSP20962 102 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 RARRES1P49788 294 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 PSEN2P49810 448 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 MFSD10Q14728 455 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 ARSHQ5FYA8 562 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 PLA2G4FQ68DD2 849 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
COL8A1-206ENST00000474648 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-206ENST00000474648 PCSK9Q8NBP7 692 aaKnown RBP11.17□□□□□ -0.62
COL8A1-206ENST00000474648 ARRDC4Q8NCT1 418 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 RASSF8Q8NHQ8 419 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 BBXQ8WY36 941 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-206ENST00000474648 SH2D3AQ9BRG2 576 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
COL8A1-206ENST00000474648 BHMT2Q9H2M3 363 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 CUEDC2Q9H467 287 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
COL8A1-206ENST00000474648 GRIN2DO15399 1336 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 MYMKA6NI61 221 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 TRAK2O60296 914 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 HBP1O60381 514 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 MBD3O95983 291 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 INSRRP14616 1297 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 ACLYP53396 1101 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 HIC1Q14526 733 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 KIAA0753Q2KHM9 967 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 RINT1Q6NUQ1 792 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 OTUD6AQ7L8S5 288 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 CKAP2LQ8IYA6 745 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 GRAMD1CQ8IYS0 662 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 U2AF1L4Q8WU68 220 aaKnown RBP11.16□□□□□ -0.62
COL8A1-206ENST00000474648 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
COL8A1-206ENST00000474648 STAMQ92783 540 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 FAM167AQ96KS9 214 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 CYP26B1Q9NR63 512 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 PHF24Q9UPV7 400 aa11.16□□□□□ -0.62
COL8A1-206ENST00000474648 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 DNM1LO00429 736 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 KINO60870 393 aaKnown RBP11.15□□□□□ -0.62
COL8A1-206ENST00000474648 CABYRO75952 493 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 TFRCP02786 760 aaKnown RBP11.15□□□□□ -0.62
COL8A1-206ENST00000474648 CYP11B2P19099 503 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 CASP1P29466 404 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 AFMP43652 599 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 GJA8P48165 433 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 DHX8Q14562 1220 aaKnown RBP11.15□□□□□ -0.62
COL8A1-206ENST00000474648 KLHL40Q2TBA0 621 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms