RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RDM1Q8NG50 284 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 OXER1Q8TDS5 423 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 TNFRSF25Q93038 417 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 FERMT2Q96AC1 680 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 ZFP91Q96JP5 570 aaPredicted RBP4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 RIT2Q99578 217 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 GPR20Q99678 358 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 FANCLQ9NW38 375 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 PRKAG2Q9UGJ0 569 aa4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 ZNF215Q9UL58 517 aaPredicted RBP4.66□□□□□ -1.66
GAPVD1-216ENST00000474637 FAM237AA0A1B0GTK4 181 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 CCDC66A2RUB6 948 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 IPO5O00410 1097 aaKnown RBP4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 POLR2DO15514 142 aaKnown RBP4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 SUPT20HL2P0C7V6 817 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 ARP10275 920 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 SFPQP23246 707 aaKnown RBP eCLIP4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 SFNP31947 248 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 CDK7P50613 346 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 MFSD10Q14728 455 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 INF2Q27J81 1249 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 LETM2Q2VYF4 491 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 RILPL1Q5EBL4 403 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 TMEM63BQ5T3F8 832 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 FAM160B1Q5W0V3 765 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 MIS18BP1Q6P0N0 1132 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 CXCL17Q6UXB2 119 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 CHRDL2Q6WN34 429 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 NYAP1Q6ZVC0 841 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 SLFN12Q8IYM2 578 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 CCDC155Q8N6L0 562 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 SLC5A5Q92911 643 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 FAM20AQ96MK3 541 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 TEKT3Q9BXF9 490 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 SMARCAD1Q9H4L7 1026 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 AZI2Q9H6S1 392 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 DDX25Q9UHL0 483 aaKnown RBP4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 ATP11BQ9Y2G3 1177 aa4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 V9GYY5 206 aaPredicted RBP4.65□□□□□ -1.66
GAPVD1-216ENST00000474637 ALPK3Q96L96 1907 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 KIAA0100Q14667 2235 aaKnown RBP4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 HAS3O00219 553 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 ADAMTS3O15072 1205 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 MSH4O15457 936 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 MARCH6O60337 910 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 CCNT1O60563 726 aaKnown RBP4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 ATP9AO75110 1047 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 LGR5O75473 907 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 ATG7O95352 703 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 F2P00734 622 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 LGALS2P05162 132 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 PSAPP07602 524 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 CLTBP09497 229 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 GNAT1P11488 350 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 SLC26A2P50443 739 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 JAK3P52333 1124 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 ATN1P54259 1190 aaPredicted RBP4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 MYL5Q02045 173 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 GOLGA8FQ08AF8 430 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 GOLGA8DPQ0D2H9 430 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 TERF2Q15554 542 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 NBPF20Q3BBV1 942 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 HSDL1Q3SXM5 330 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 TRIM60Q495X7 471 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 USP49Q70CQ1 688 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 PLPPR4Q7Z2D5 763 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 GRAMD1CQ8IYS0 662 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 C7orf61Q8IZ16 206 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 C7orf31Q8N865 590 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 KIF18AQ8NI77 898 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 CYP2W1Q8TAV3 490 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 LENG9Q96B70 501 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 RNF25Q96BH1 459 aaPredicted RBP4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 ST7Q9NRC1 585 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 SERTAD1Q9UHV2 236 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 EMSYQ7Z589 1322 aa4.65□□□□□ -1.67
GAPVD1-216ENST00000474637 SCN10AQ9Y5Y9 1956 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 HTTP42858 3142 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 GSTTP1A0A1W2PQM5 241 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 FAM205CA6NFA0 338 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 WDR64B1ANS9 1081 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 H3BRB1 525 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 PQBP1O60828 265 aaKnown RBP4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 GAS7O60861 476 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 RPLP2P05387 115 aaKnown RBP4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 TCF7P36402 384 aaPredicted RBP4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 ACTR2P61160 394 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 ITGB3BPQ13352 177 aaPredicted RBP4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 POSTNQ15063 836 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 EARS2Q5JPH6 523 aaKnown RBP4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 LRCH2Q5VUJ6 765 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 SYT10Q6XYQ8 523 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 AFAP1L1Q8TED9 768 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 KAT2BQ92831 832 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 C16orf70Q9BSU1 422 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 CSRNP2Q9H175 543 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 TUT1Q9H6E5 874 aaKnown RBP4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 KCND1Q9NSA2 647 aa4.64□□□□□ -1.67
GAPVD1-216ENST00000474637 ERAP1Q9NZ08 941 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms