RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 FAM20AQ96MK3 541 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 SH2D3AQ9BRG2 576 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 PRDM12Q9H4Q4 367 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 CERS4Q9HA82 394 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 NRBP2Q9NSY0 501 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 SEPT9Q9UHD8 586 aaPredicted RBP18.02■□□□□ 0.48
ITGB1-210ENST00000474568 VAV3Q9UKW4 847 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 STXBP5LQ9Y2K9 1186 aa18.02■□□□□ 0.48
ITGB1-210ENST00000474568 KIF28PB7ZC32 967 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 AMHP03971 560 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 CD52P31358 61 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 CLCN3P51790 818 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 GNL2Q13823 731 aaKnown RBP18.01■□□□□ 0.47
ITGB1-210ENST00000474568 MTERF2Q49AM1 385 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 IER5Q5VY09 327 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 LRRC71Q8N4P6 559 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 RDM1Q8NG50 284 aa18.01■□□□□ 0.47
ITGB1-210ENST00000474568 LCHNA4D1U4 455 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 DDX11L8A8MPP1 907 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 EFCAB14O75071 495 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 UPP2O95045 317 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 BAG4O95429 457 aaKnown RBP18■□□□□ 0.47
ITGB1-210ENST00000474568 VTNP04004 478 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 FOSL2P15408 326 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 PPP2R5CQ13362 524 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 CALCRLQ16602 461 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 KIAA0319LQ8IZA0 1049 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 FBXO18Q8NFZ0 1043 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 ZNF668Q96K58 619 aaPredicted RBP18■□□□□ 0.47
ITGB1-210ENST00000474568 BACH2Q9BYV9 841 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 CELF4Q9BZC1 486 aaKnown RBP18■□□□□ 0.47
ITGB1-210ENST00000474568 AGO3Q9H9G7 860 aaKnown RBP18■□□□□ 0.47
ITGB1-210ENST00000474568 CDHR5Q9HBB8 845 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 CEP131Q9UPN4 1083 aa18■□□□□ 0.47
ITGB1-210ENST00000474568 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-210ENST00000474568 TBX3O15119 743 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 NEMFO60524 1076 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 IBSPP21815 317 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-210ENST00000474568 MCM7P33993 719 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 TMEM266Q2M3C6 531 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 EFCAB12Q6NXP0 572 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 TSHZ1Q6ZSZ6 1077 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 SPRED2Q7Z698 418 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 APBB2Q92870 758 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 SUGCTQ9HAC7 445 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
ITGB1-210ENST00000474568 GJB5O95377 273 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 RPLP2P05387 115 aaKnown RBP17.98■□□□□ 0.47
ITGB1-210ENST00000474568 TXKP42681 527 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 PSMC5P62195 406 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 CYP4A11Q02928 519 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 MKRN4PQ13434 485 aaPredicted RBP17.98■□□□□ 0.47
ITGB1-210ENST00000474568 ZNF174Q15697 407 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 KIZQ2M2Z5 673 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 XKR3Q5GH77 459 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 PLA2G4FQ68DD2 849 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 SLFN12Q8IYM2 578 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 NME8Q8N427 588 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 DYDC2Q96IM9 177 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 TMEM60Q9H2L4 133 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 RGL1Q9NZL6 768 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 AKT3Q9Y243 479 aa17.98■□□□□ 0.47
ITGB1-210ENST00000474568 RFXAPO00287 272 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 MAGEB2O15479 319 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 STBD1O95210 358 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 TBC1D8BQ0IIM8 1120 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 PAK2Q13177 524 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
ITGB1-210ENST00000474568 EPHA7Q15375 998 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 RAD9AQ99638 391 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 OSMRQ99650 979 aa17.97■□□□□ 0.47
ITGB1-210ENST00000474568 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-210ENST00000474568 WRAP73Q9P2S5 460 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-210ENST00000474568 IGFBP4P22692 258 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 GJB2P29033 226 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 QARSP47897 775 aaKnown RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 MCM2P49736 904 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 TAP1Q03518 808 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 SPIRE1Q08AE8 756 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 NBR1Q14596 966 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 TARBP2Q15633 366 aaKnown RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 TMEM40Q8WWA1 233 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 MAP7D2Q96T17 732 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 LXNQ9BS40 222 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 TTC12Q9H892 705 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 BMP2KQ9NSY1 1161 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 PADI3Q9ULW8 664 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 PCDHA12Q9UN75 941 aa17.96■□□□□ 0.47
ITGB1-210ENST00000474568 NOC2LQ9Y3T9 749 aaKnown RBP17.96■□□□□ 0.47
ITGB1-210ENST00000474568 CDH23Q9H251 3354 aa17.96■□□□□ 0.46
ITGB1-210ENST00000474568 EPOPA6NHQ4 379 aa17.95■□□□□ 0.46
ITGB1-210ENST00000474568 ENPP3O14638 875 aa17.95■□□□□ 0.46
ITGB1-210ENST00000474568 RPS6KA5O75582 802 aa17.95■□□□□ 0.46
ITGB1-210ENST00000474568 P4HBP07237 508 aaKnown RBP17.95■□□□□ 0.46
ITGB1-210ENST00000474568 TMOD1P28289 359 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms