RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 ABHD15Q6UXT9 468 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 RBM23Q86U06 439 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 CCDC82Q8N4S0 544 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 ZNF713Q8N859 430 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 MICAL1Q8TDZ2 1067 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 TRAPPC12Q8WVT3 735 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 SUSD6Q92537 303 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 LZTS1Q9Y250 596 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 USP15Q9Y4E8 981 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 COL1A2P08123 1366 aa13.14□□□□□ -0.31
EXOSC1-207ENST00000474309 PLXNA4Q9HCM2 1894 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 SLC27A2O14975 620 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 MGEA5O60502 916 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 PTPN5P54829 565 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 AP3B2Q13367 1082 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 DUSP6Q16828 381 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 FAM160B1Q5W0V3 765 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 RASGRP4Q8TDF6 673 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 ADAM2Q99965 735 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 CDHR5Q9HBB8 845 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 BARX2Q9UMQ3 279 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 ST3GAL5Q9UNP4 418 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
EXOSC1-207ENST00000474309 DENND3A2RUS2 1198 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 FSCN2O14926 492 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 FGF18O76093 207 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 CSPG5O95196 566 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 SREBF1P36956 1147 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 CLK2P49760 499 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 GATMP50440 423 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 CRYBB1P53674 252 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 NAPAP54920 295 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 PLCB3Q01970 1234 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 SIGLEC14Q08ET2 396 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 KCNC3Q14003 757 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 SUGP1Q8IWZ8 645 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 COLGALT1Q8NBJ5 622 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 IRF2BPLQ9H1B7 796 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 TYW1Q9NV66 732 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 TMEM161AQ9NX61 479 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 TMEM260Q9NX78 707 aa13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-207ENST00000474309 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 BACH1O14867 736 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 PER2O15055 1255 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 CYP3A4P08684 503 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 LAG3P18627 525 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 ADCY7P51828 1080 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 ERVFC1P60507 584 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 FUT2Q10981 343 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 IER5LQ5T953 404 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 CREB3L3Q68CJ9 461 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 THNSL1Q8IYQ7 743 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 MRPS27Q92552 414 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 CWH43Q9H720 699 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 ATP6V0A4Q9HBG4 840 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 ZNF302Q9NR11 478 aa13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-207ENST00000474309 ZBTB42B2RXF5 422 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 HOXA2O43364 376 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 CCNE2O96020 404 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 HOXB8P17481 243 aaPredicted RBP13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 ATP4AP20648 1035 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 ZNF76P36508 570 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 NUBP1P53384 320 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 DSC3Q14574 896 aa13.1□□□□□ -0.31
EXOSC1-207ENST00000474309 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms