RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ST3GAL2Q16842 350 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 CCDC30Q5VVM6 783 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 KAZNQ674X7 775 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 ITPRIPL1Q6GPH6 555 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 DESI1Q6ICB0 168 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 RETSATQ6NUM9 610 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 MTHFD1LQ6UB35 978 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 SLC9B2Q86UD5 537 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 ZBTB46Q86UZ6 589 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 SPATA2LQ8IUW3 424 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 NRSN1Q8IZ57 195 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 PARD3BQ8TEW8 1205 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 CCT6BQ92526 530 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 HDAC2Q92769 488 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 KIF1BPQ96EK5 621 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 MFSD3Q96ES6 412 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 NRBF2Q96F24 287 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 CNDP1Q96KN2 507 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 BARD1Q99728 777 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 VCPKMTQ9H867 229 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 TMEM165Q9HC07 324 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 TOPORSQ9NS56 1045 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 WNK3Q9BYP7 1800 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 NCAM2O15394 837 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 P4HA2O15460 535 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 DDX3YO15523 660 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 JUNDP17535 347 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 TPP2P29144 1249 aaPredicted RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 HSD17B2P37059 387 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 EPS15P42566 896 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 MCM2P49736 904 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 MRPS5P82675 430 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ADCY1Q08828 1119 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 DPYDQ12882 1025 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 RBBP5Q15291 538 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ATP13A4Q4VNC1 1196 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 C2orf27AQ580R0 203 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 CXorf57Q6NSI4 855 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 RGMBQ6NW40 437 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 BICDL1Q6ZP65 573 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 SMIM5Q71RC9 77 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 RSPH3Q86UC2 560 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 GALNT6Q8NCL4 622 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 CEP295NLQ96MC4 621 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 SETDB2Q96T68 719 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ADPGKQ9BRR6 497 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 DESI2Q9BSY9 194 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 LSM14BQ9BX40 385 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 MRPL46Q9H2W6 279 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 RABEP2Q9H5N1 569 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 EPHX3Q9H6B9 360 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 RRN3Q9NYV6 651 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 MAP10Q9P2G4 905 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ZNF624Q9P2J8 865 aaPredicted RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 SEPT3Q9UH03 358 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ADAMTS1Q9UHI8 967 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ATP11BQ9Y2G3 1177 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 R3HCC1Q9Y3T6 440 aaKnown RBP6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 AKAP11Q9UKA4 1901 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 ABCC6O95255 1503 aa6.71□□□□□ -1.33
SMARCE1-208ENST00000474246 KMT2BQ9UMN6 2715 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 LRRC72A6NJI9 287 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 F8W031 263 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 NFKBIEO00221 500 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 XPOTO43592 962 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 DKC1O60832 514 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 DIAPH2O60879 1101 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 SKIP12755 728 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 C21orf58P58505 322 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 TUBA1BP68363 451 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 RELQ04864 619 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 IQCB1Q15051 598 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 C21orf62-AS1Q17RA5 79 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 KRT71Q3SY84 523 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 TUBA1AQ71U36 451 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 EPHX4Q8IUS5 362 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 FAM186BQ8IYM0 893 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 TMEM57Q8N5G2 664 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 SPATA5Q8NB90 893 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 MTMR8Q96EF0 704 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 RADILQ96JH8 1075 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 GDF15Q99988 308 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 OSBPL10Q9BXB5 764 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 TEX13BQ9BXU2 312 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 TNKS2Q9H2K2 1166 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 NRDE2Q9H7Z3 1164 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 FBRSQ9HAH7 460 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 SEPT11Q9NVA2 429 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
SMARCE1-208ENST00000474246 KRBA1A5PL33 1030 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 A8MVJ9 347 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 DYNC1I1O14576 645 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 AREL1O15033 823 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 DDHD2O94830 711 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 S100A6P06703 90 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 FOSL2P15408 326 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ATP5DP30049 168 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 GNA15P30679 374 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 ZAP70P43403 619 aa6.7□□□□□ -1.34
SMARCE1-208ENST00000474246 PHKA1P46020 1223 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms