RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PYM1Q9BRP8 204 aaKnown RBP10.18□□□□□ -0.78
SMG5-203ENST00000473643 C16orf70Q9BSU1 422 aa10.18□□□□□ -0.78
SMG5-203ENST00000473643 NT5C3AQ9H0P0 336 aa10.18□□□□□ -0.78
SMG5-203ENST00000473643 ZSWIM4Q9H7M6 989 aa10.18□□□□□ -0.78
SMG5-203ENST00000473643 CCDC39Q9UFE4 941 aa10.18□□□□□ -0.78
SMG5-203ENST00000473643 KCNH3Q9ULD8 1083 aa10.18□□□□□ -0.78
SMG5-203ENST00000473643 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
SMG5-203ENST00000473643 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 EMSYQ7Z589 1322 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 KDM3AQ9Y4C1 1321 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 A0A1B0GVL5 298 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 NOP56O00567 594 aaKnown RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 FGBP02675 491 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 PFKFB1P16118 471 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 TCF7P36402 384 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 CCT6AP40227 531 aaKnown RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 PSEN2P49810 448 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 SLC26A2P50443 739 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 NDUFA8P51970 172 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 CCL23P55773 120 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 PSMC5P62195 406 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 FAM160A1Q05DH4 1040 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 GRB10Q13322 594 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 NFKBIBQ15653 356 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 E2F4Q16254 413 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 ECM1Q16610 540 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 PTGISQ16647 500 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 KIAA0753Q2KHM9 967 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 GDF6Q6KF10 455 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 SWSAP1Q6NVH7 229 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 PSRC1Q6PGN9 363 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 PLPPR4Q7Z2D5 763 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 CCDC60Q8IWA6 550 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 ELOA2Q8IYF1 753 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 FMR1NBQ8N0W7 255 aaPredicted RBP10.17□□□□□ -0.78
SMG5-203ENST00000473643 C7orf31Q8N865 590 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 IQUBQ8NA54 791 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 HERVK_113Q902F9 699 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 ATP6V0A1Q93050 837 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 CALML4Q96GE6 196 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 DYDC2Q96IM9 177 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 TIGD1Q96MW7 591 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 KATNAL1Q9BW62 490 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 GOLPH3LQ9H4A5 285 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 RGL1Q9NZL6 768 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 GTF2IRD1Q9UHL9 959 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 SAMM50Q9Y512 469 aa10.17□□□□□ -0.78
SMG5-203ENST00000473643 IGSF9BQ9UPX0 1349 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 A0A087X0B3 334 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 SORBS3O60504 671 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 STBD1O95210 358 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 MBD3O95983 291 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 PFKMP08237 780 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 IQCF3P0C7M6 154 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 ZNF286BP0CG31 522 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 LIG1P18858 919 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 SYKP43405 635 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 STAT5BP51692 787 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 CHMP4BP1P59074 171 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 SP4Q02446 784 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 RBL2Q08999 1139 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 BFSP2Q13515 415 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 MFSD10Q14728 455 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 KARSQ15046 597 aaKnown RBP10.16□□□□□ -0.78
SMG5-203ENST00000473643 RRAGBQ5VZM2 374 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 FAM160B1Q5W0V3 765 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 GPT2Q8TD30 523 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 SCLYQ96I15 445 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 NACC1Q96RE7 527 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 LXNQ9BS40 222 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 SEMA6BQ9H3T3 888 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 CUEDC2Q9H467 287 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 SMARCAD1Q9H4L7 1026 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 ZNF302Q9NR11 478 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
SMG5-203ENST00000473643 WRAP73Q9P2S5 460 aaPredicted RBP10.16□□□□□ -0.78
SMG5-203ENST00000473643 HDAC6Q9UBN7 1215 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 GABBR1Q9UBS5 961 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 STK17AQ9UEE5 414 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 KIAA1024Q9UPX6 916 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 NOD1Q9Y239 953 aa10.16□□□□□ -0.78
SMG5-203ENST00000473643 KIAA1217Q5T5P2 1943 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 POTEB3A0JP26 581 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 H3BRB1 525 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 POLR2DO15514 142 aaKnown RBP10.15□□□□□ -0.78
SMG5-203ENST00000473643 ZNF862O60290 1169 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 ZNF202O95125 648 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 LGALS2P05162 132 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 SLFN14P0C7P3 912 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 PLCG1P19174 1290 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 ATP4AP20648 1035 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 HOXC8P31273 242 aa10.15□□□□□ -0.78
SMG5-203ENST00000473643 RFC2P35250 354 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms