RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 AGO4Q9HCK5 861 aaKnown RBP11.02□□□□□ -0.65
MCF2L-223ENST00000473345 TRPC6Q9Y210 931 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
MCF2L-223ENST00000473345 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 H0Y858 1186 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 EDIL3O43854 480 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 GPR32O75388 356 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 KLRC1P26715 233 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 PTPN5P54829 565 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 KRT76Q01546 638 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 SIGLEC14Q08ET2 396 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
MCF2L-223ENST00000473345 TRAF1Q13077 416 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 PTPN21Q16825 1174 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 IER5Q5VY09 327 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 PLPP4Q5VZY2 271 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 ANKRD54Q6NXT1 300 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 LLGL2Q6P1M3 1020 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 ABHD15Q6UXT9 468 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 TMEM184AQ6ZMB5 413 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 ASCL5Q7RTU5 278 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 GIMAP8Q8ND71 665 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-223ENST00000473345 CASD1Q96PB1 797 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 FTHL17Q9BXU8 183 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 LSG1Q9H089 658 aaKnown RBP11.01□□□□□ -0.65
MCF2L-223ENST00000473345 TLR9Q9NR96 1032 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 RGS18Q9NS28 235 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 ST3GAL5Q9UNP4 418 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
MCF2L-223ENST00000473345 ERICH2A1L162 156 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 FAM86B1E9PN63 330 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 DDX39AO00148 427 aaKnown RBP11□□□□□ -0.65
MCF2L-223ENST00000473345 BRD1O95696 1058 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 WEE2P0C1S8 567 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 FAM86B2P0C5J1 330 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 ATF7P17544 494 aaPredicted RBP11□□□□□ -0.65
MCF2L-223ENST00000473345 STAT5BP51692 787 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 FAM189BP81408 668 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 KIZQ2M2Z5 673 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 PLPPR4Q7Z2D5 763 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 TMEM105Q8N8V8 129 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
MCF2L-223ENST00000473345 CRYGNQ8WXF5 182 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 ZNF668Q96K58 619 aaPredicted RBP11□□□□□ -0.65
MCF2L-223ENST00000473345 OSMRQ99650 979 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 FAM217BQ9NTX9 383 aaPredicted RBP11□□□□□ -0.65
MCF2L-223ENST00000473345 NFASCO94856 1347 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 MYO15AQ9UKN7 3530 aa11□□□□□ -0.65
MCF2L-223ENST00000473345 IGLV3-22A0A075B6J6 115 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 C2CD4DB7Z1M9 353 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 MEIS1O00470 390 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 SLC27A2O14975 620 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 GFRA3O60609 400 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 C22orf31O95567 290 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 VTNP04004 478 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 TECP42680 631 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
MCF2L-223ENST00000473345 CLLU1OSQ5K130 101 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 HEATR3Q7Z4Q2 680 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 SKAP1Q86WV1 359 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 TMEM173Q86WV6 379 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-223ENST00000473345 LINC01465Q8N7H1 131 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 MICAL1Q8TDZ2 1067 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 CDHR1Q96JP9 859 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 ANO3Q9BYT9 981 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 POMKQ9H5K3 350 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 SEC63Q9UGP8 760 aaKnown RBP10.99□□□□□ -0.65
MCF2L-223ENST00000473345 BRPF3Q9ULD4 1205 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 PCDHB7Q9Y5E2 793 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 ZDBF2Q9HCK1 2354 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 CFAP54Q96N23 3096 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 KAT6AQ92794 2004 aa10.99□□□□□ -0.65
MCF2L-223ENST00000473345 SPDYE3A6NKU9 549 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 B4GALT3O60512 393 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 ASGR2P07307 311 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 FGFR4P22455 802 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 KIF5BP33176 963 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 CLCN3P51790 818 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 UBE3AQ05086 875 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 SART3Q15020 963 aaKnown RBP10.98□□□□□ -0.65
MCF2L-223ENST00000473345 CEP55Q53EZ4 464 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 SLC24A5Q71RS6 500 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 TRMT1LQ7Z2T5 733 aaKnown RBP10.98□□□□□ -0.65
MCF2L-223ENST00000473345 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
MCF2L-223ENST00000473345 THNSL1Q8IYQ7 743 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 C12orf76Q8N812 135 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-223ENST00000473345 FANCBQ8NB91 859 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 BCL7CQ8WUZ0 217 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-223ENST00000473345 MRPS27Q92552 414 aaKnown RBP10.98□□□□□ -0.65
MCF2L-223ENST00000473345 RIPOR3Q96MK2 946 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 TCF25Q9BQ70 676 aa10.98□□□□□ -0.65
MCF2L-223ENST00000473345 ADAMTS10Q9H324 1103 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms