RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PDHXO00330 501 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 BIN1O00499 593 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 ENTPD3O75355 529 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 CIAO1O76071 339 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 UBOX5O94941 541 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 SRFP11831 508 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 EN2P19622 333 aaPredicted RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 IL15P40933 162 aaPredicted RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 PSMC4P43686 418 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 GJA8P48165 433 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 FXR1P51114 621 aaKnown RBP eCLIP4.31□□□□□ -1.72
XRN1-209ENST00000472625 PWP1Q13610 501 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 ALDH1L2Q3SY69 923 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 C17orf99Q6UX52 265 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 ATG4DQ86TL0 474 aaPredicted RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 DZIP1Q86YF9 867 aaKnown RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 CERS3Q8IU89 383 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 SCYL3Q8IZE3 742 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 FAM43AQ8N2R8 423 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 CYB5D2Q8WUJ1 264 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 DPF3Q92784 378 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 COA7Q96BR5 231 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 HSPA12BQ96MM6 686 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 BICC1Q9H694 974 aaKnown RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 ATP13A1Q9HD20 1204 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 C19orf73Q9NVV2 129 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 TPX2Q9ULW0 747 aaKnown RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 FZD1Q9UP38 647 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 CEP131Q9UPN4 1083 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 JAG2Q9Y219 1238 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 RIPOR2Q9Y4F9 1068 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 SUPT16HQ9Y5B9 1047 aaKnown RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 SNX11Q9Y5W9 270 aa4.31□□□□□ -1.72
XRN1-209ENST00000472625 LRRFIP2Q9Y608 721 aaKnown RBP4.31□□□□□ -1.72
XRN1-209ENST00000472625 A0A0G2JLL6 359 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 H3BS24 57 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 SNAP23O00161 211 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 EYA2O00167 538 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 TNPO2O14787 897 aaKnown RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 CTNND1O60716 968 aaKnown RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 FARP2O94887 1054 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 CBX7O95931 251 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 NBPF7P0C2Y1 421 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 UBTFL1P0CB47 393 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 ZNF76P36508 570 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 GCLCP48506 637 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 GSTO1P78417 241 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 MVPQ14764 893 aaKnown RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 ATP2B3Q16720 1220 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 FAM110CQ1W6H9 321 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 FYB2Q5VWT5 728 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 APOBEC3HQ6NTF7 200 aaKnown RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 SLC23A3Q6PIS1 610 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 TMED8Q6PL24 325 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 ATF7IPQ6VMQ6 1270 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 PRRT2Q7Z6L0 340 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 BAHD1Q8TBE0 780 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 SH3TC2Q8TF17 1288 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 SOCS4Q8WXH5 440 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 ZKSCAN4Q969J2 545 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 SUCLG2Q96I99 432 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 NOL10Q9BSC4 688 aaKnown RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 IDI2Q9BXS1 227 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 DUSP15Q9H1R2 295 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 CARS2Q9HA77 564 aaKnown RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 AS3MTQ9HBK9 375 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 GINM1Q9NU53 330 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.3□□□□□ -1.72
XRN1-209ENST00000472625 ZNF112Q9UJU3 913 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 PCDHB14Q9Y5E9 798 aa4.3□□□□□ -1.72
XRN1-209ENST00000472625 COL2A1P02458 1487 aaPredicted RBP4.3□□□□□ -1.72
XRN1-209ENST00000472625 ATRNL1Q5VV63 1379 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
XRN1-209ENST00000472625 OTOFQ9HC10 1997 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 GAKO14976 1311 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 MEIS3P2A8K0S8 358 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 H0YGN5 161 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 LRRN2O75325 713 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 HMGCRP04035 888 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 LDHCP07864 332 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 ACRP10323 421 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 CCL5P13501 91 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 FGFR2P21802 821 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 POLR2BP30876 1174 aaKnown RBP4.29□□□□□ -1.72
XRN1-209ENST00000472625 CACNB3P54284 484 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 PDE4BQ07343 736 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 GAB4Q2WGN9 574 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 EPHA10Q5JZY3 1008 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 SFRP5Q5T4F7 317 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 CDCP2Q5VXM1 449 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 OVOS1Q6IE37 1185 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 NECAB2Q7Z6G3 386 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 MFSD4AQ8N468 514 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 FAM13CQ8NE31 585 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 U2AF1L4Q8WU68 220 aaKnown RBP4.29□□□□□ -1.72
XRN1-209ENST00000472625 ASB11Q8WXH4 323 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 API5Q9BZZ5 524 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms