RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TPH2Q8IWU9 490 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 METTL13Q8N6R0 699 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 C4orf32Q8N8J7 132 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 DYDC2Q96IM9 177 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 HSD17B14Q9BPX1 270 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.91■□□□□ 0.14
BRCA1-211ENST00000472490 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 PCDH10Q9P2E7 1040 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 PDE4DIPQ5VU43 2346 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 DNAH12Q6ZR08 3092 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
BRCA1-211ENST00000472490 POTEMA6NI47 508 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 ZBTB42B2RXF5 422 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 SLITRK3O94933 977 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 C22orf31O95567 290 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 CXCL10P02778 98 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 CTSHP09668 335 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 YWHABP31946 246 aaKnown RBP15.9■□□□□ 0.14
BRCA1-211ENST00000472490 DNM2P50570 870 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 MRPS6P82932 125 aaKnown RBP15.9■□□□□ 0.14
BRCA1-211ENST00000472490 ATP2C1P98194 919 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-211ENST00000472490 CYP4A11Q02928 519 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 SLC7A3Q8WY07 619 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 HERVK_113Q902F9 699 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 MAP7D2Q96T17 732 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 FAM49AQ9H0Q0 323 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-211ENST00000472490 RGL1Q9NZL6 768 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 LRWD1Q9UFC0 647 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 MTMR6Q9Y217 621 aa15.9■□□□□ 0.14
BRCA1-211ENST00000472490 LTBP2Q14767 1821 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 EFCAB14O75071 495 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 BAIAP3O94812 1187 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 LYPLA2O95372 231 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.13
BRCA1-211ENST00000472490 MUTP22033 750 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 RPA1P27694 616 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 CDC42EP1Q00587 391 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 CTTNQ14247 550 aaKnown RBP15.89■□□□□ 0.13
BRCA1-211ENST00000472490 TARBP2Q15633 366 aaKnown RBP15.89■□□□□ 0.13
BRCA1-211ENST00000472490 MTERF2Q49AM1 385 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 C9orf50Q5SZB4 431 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 EFCAB12Q6NXP0 572 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 CNKSR3Q6P9H4 555 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 TRAF7Q6Q0C0 670 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 FAM43BQ6ZT52 329 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-211ENST00000472490 ANO5Q75V66 913 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 C16orf59Q7L2K0 433 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 OTOP2Q7RTS6 562 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 CEP170P1Q96L14 293 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 CCDC43Q96MW1 224 aaKnown RBP15.89■□□□□ 0.13
BRCA1-211ENST00000472490 POLR3CQ9BUI4 534 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-211ENST00000472490 CYP26B1Q9NR63 512 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 SQORQ9Y6N5 450 aa15.89■□□□□ 0.13
BRCA1-211ENST00000472490 GAS2O43903 313 aaKnown RBP15.88■□□□□ 0.13
BRCA1-211ENST00000472490 NBNO60934 754 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 STBD1O95210 358 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 RFC5P40937 340 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 IKBKEQ14164 716 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 ODR4Q5SWX8 454 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 KRT79Q5XKE5 535 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 KIAA0319LQ8IZA0 1049 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 SEPT8Q92599 483 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 APBB2Q92870 758 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 CELF4Q9BZC1 486 aaKnown RBP15.88■□□□□ 0.13
BRCA1-211ENST00000472490 SUGCTQ9HAC7 445 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 ANKEF1Q9NU02 776 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 TRPV2Q9Y5S1 764 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 CDY2AQ9Y6F7 541 aa15.88■□□□□ 0.13
BRCA1-211ENST00000472490 ABHD14A-ACY1A0A1B0GW23 586 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 ZBBXA8MT70 800 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 CHRNA1P02708 482 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 POLGP54098 1239 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-211ENST00000472490 MGAT3Q09327 533 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 RESTQ13127 1097 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 CATSPER3Q86XQ3 398 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 ZBTB10Q96DT7 871 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 NACC1Q96RE7 527 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 WRAP73Q9P2S5 460 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-211ENST00000472490 AKT3Q9Y243 479 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 SLC4A7Q9Y6M7 1214 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 KDM3AQ9Y4C1 1321 aa15.87■□□□□ 0.13
BRCA1-211ENST00000472490 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 MAFO75444 373 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 CCT6AP40227 531 aaKnown RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 CRYBB1P53674 252 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 MBTPS1Q14703 1052 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 GPNMBQ14956 572 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 SF3A1Q15459 793 aaKnown RBP15.86■□□□□ 0.13
BRCA1-211ENST00000472490 PLEKHG4Q58EX7 1191 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 XKR9Q5GH70 373 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 RASIP1Q5U651 963 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 PLA2G4FQ68DD2 849 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 TSHZ1Q6ZSZ6 1077 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 KCTD17Q8N5Z5 321 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 SPRYD3Q8NCJ5 442 aa15.86■□□□□ 0.13
BRCA1-211ENST00000472490 TCP11Q8WWU5 503 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms