RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MARK3P27448 753 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 POLGP54098 1239 aaPredicted RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 MORC3Q14149 939 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 TPD52L1Q16890 204 aaPredicted RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 MTERF2Q49AM1 385 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 PLA2G4FQ68DD2 849 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 RNF214Q8ND24 703 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 MCPH1Q8NEM0 835 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 LRRC15Q8TF66 581 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 FUCA2Q9BTY2 467 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 RUSC1Q9BVN2 902 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 ATP6V0A4Q9HBG4 840 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 PARVGQ9HBI0 331 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 CYP26B1Q9NR63 512 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 LARSQ9P2J5 1176 aaKnown RBP10.83□□□□□ -0.68
CCM2-204ENST00000470837 KCNG1Q9UIX4 513 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 TSKSQ9UJT2 592 aa10.83□□□□□ -0.68
CCM2-204ENST00000470837 PSMA7O14818 248 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 ZBTB39O15060 712 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 SEPT4O43236 478 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 ZNF862O60290 1169 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 HBP1O60381 514 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 MSCO60682 206 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 KPNA6O60684 536 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 LGALS2P05162 132 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 MMP3P08254 477 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 CYBAP13498 195 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 ELNP15502 786 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 RFC5P40937 340 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 TBC1D8BQ0IIM8 1120 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 GIT2Q14161 759 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 DPCR1Q3MIW9 517 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 FAM26FQ5R3K3 315 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 FAM102BQ5T8I3 360 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 C1orf186Q6ZWK4 172 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 ANO5Q75V66 913 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 MAEAQ7L5Y9 396 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 MYCT1Q8N699 235 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 SLC17A8Q8NDX2 589 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 ATP8B4Q8TF62 1192 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 KIFAP3Q92845 792 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 IFT74Q96LB3 600 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 KATNAL1Q9BW62 490 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
CCM2-204ENST00000470837 SEL1LQ9UBV2 794 aa10.82□□□□□ -0.68
CCM2-204ENST00000470837 GNEQ9Y223 722 aaKnown RBP10.82□□□□□ -0.68
CCM2-204ENST00000470837 NPHP3-ACAD11A0A0J9YXS1 232 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 BICDL2A1A5D9 508 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 A6NJR5 290 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 H3BRB1 525 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 KLRC4O43908 158 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 HIP1RO75146 1068 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 MYL3P08590 195 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 C6orf222P0C671 652 aaPredicted RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 ERCC5P28715 1186 aaPredicted RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 GRK4P32298 578 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 MRE11P49959 708 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 DNM2P50570 870 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 SMTNP53814 917 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 NPEPPSP55786 919 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 CACNB2Q08289 660 aaPredicted RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 COASYQ13057 564 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 DMP1Q13316 513 aaPredicted RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 FSCN1Q16658 493 aaKnown RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 ARSHQ5FYA8 562 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 ODR4Q5SWX8 454 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 KLHL10Q6JEL2 608 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 TRIM50Q86XT4 487 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 RETREG2Q8NC44 543 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 DNAJC19Q96DA6 116 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 TUT1Q9H6E5 874 aaKnown RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 MRPL44Q9H9J2 332 aaKnown RBP10.81□□□□□ -0.68
CCM2-204ENST00000470837 SLC39A2Q9NP94 309 aa10.81□□□□□ -0.68
CCM2-204ENST00000470837 THSD7BQ9C0I4 1608 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 LCTP09848 1927 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 H0YCG3 227 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 IGHA2P01877 340 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 INHAP05111 366 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 ZNF286BP0CG31 522 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 TMOD1P28289 359 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 ABCD1P33897 745 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 MYL5Q02045 173 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 PAK1Q13153 545 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 EMC2Q15006 297 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 PLCB4Q15147 1175 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 PPP2R5AQ15172 486 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 ZNF484Q5JVG2 852 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 GNASQ5JWF2 1037 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 TMEM63BQ5T3F8 832 aa10.8□□□□□ -0.68
CCM2-204ENST00000470837 C11orf57Q6ZUT1 292 aaPredicted RBP10.8□□□□□ -0.68
CCM2-204ENST00000470837 GAS2L3Q86XJ1 694 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms