RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 FGD4Q96M96 766 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 EYA3Q99504 573 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 MPHOSPH8Q99549 860 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 G6PC3Q9BUM1 346 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 NOL6Q9H6R4 1146 aaKnown RBP8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ADARB2Q9NS39 739 aaKnown RBP8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ZMYM5Q9UJ78 669 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ZNF281Q9Y2X9 895 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 FHOD1Q9Y613 1164 aa8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 POLR2AP24928 1970 aaKnown RBP8.38□□□□□ -1.07
PTP4A1-202ENST00000470661 ZNF804BA4D1E1 1349 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 ADM5C9JUS6 153 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 H7C1D1 291 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 ALDH1L1O75891 902 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 VIL1P09327 827 aaKnown RBP8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 ITGA4P13612 1032 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 BMP8BP34820 402 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 DUSP4Q13115 394 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 TCEAL1Q15170 157 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 HEATR6Q6AI08 1181 aaKnown RBP8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 PNMA8AQ86V59 439 aaPredicted RBP8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 PDZD8Q8NEN9 1154 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 ABHD4Q8TB40 342 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 VPS33BQ9H267 617 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 SP110Q9HB58 689 aa8.37□□□□□ -1.07
PTP4A1-202ENST00000470661 SCN4AP35499 1836 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 AOX1Q06278 1338 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 ZNF503-AS2A6NEH8 195 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 F8W031 263 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 ZNF205O95201 554 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 CELF2O95319 508 aaKnown RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 GSNP06396 782 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 VAV1P15498 845 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 GYG1P46976 350 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 KCNJ4P48050 445 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 PPP2R5DQ14738 602 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 CCDC57Q2TAC2 916 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 TAF7LQ5H9L4 462 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 LARP1BQ659C4 914 aaKnown RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 LDHAL6AQ6ZMR3 332 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 USP50Q70EL3 339 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 LINC01599Q8WXQ3 324 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 LIN37Q96GY3 246 aaPredicted RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 CDADC1Q9BWV3 514 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 CNNM1Q9NRU3 951 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 ACTR10Q9NZ32 417 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 PRKAG3Q9UGI9 489 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 ABT1Q9ULW3 272 aaKnown RBP8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 LRRC37AA6NMS7 1700 aa8.36□□□□□ -1.07
PTP4A1-202ENST00000470661 B2RBV5 119 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 NAALADL2Q58DX5 795 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 TMEM67Q5HYA8 995 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 DACT2Q5SW24 774 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 CWF19L1Q69YN2 538 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 CYP4F22Q6NT55 531 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 MOB2Q70IA6 237 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 ADAT2Q7Z6V5 191 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 OXR1Q8N573 874 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 CERS5Q8N5B7 392 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 MAP6Q96JE9 813 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 GMLQ99445 158 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 RNF32Q9H0A6 362 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 GBP3Q9H0R5 595 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 SIL1Q9H173 461 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 AP5S1Q9NUS5 200 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.073e-10■■□□□ 14.3
PTP4A1-202ENST00000470661 WHRNQ9P202 907 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 SUSD2Q9UGT4 822 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 PA2G4Q9UQ80 394 aaKnown RBP8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 MYH3P11055 1940 aa8.35□□□□□ -1.07
PTP4A1-202ENST00000470661 IRS2Q9Y4H2 1338 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 FITM1A5D6W6 292 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 SASH1O94885 1247 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 GLI1P08151 1106 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 GALK1P51570 392 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 ALDH1L2Q3SY69 923 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 TNNI3KQ59H18 835 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 TTLL5Q6EMB2 1281 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 C6orf15Q6UXA7 325 aaPredicted RBP8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 KRT26Q7Z3Y9 468 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 DPF2Q92785 391 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 HHIPL1Q96JK4 782 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 MEIS3Q99687 375 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 SLC12A9Q9BXP2 914 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 ANKRD2Q9GZV1 360 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 CD209Q9NNX6 404 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 FZD1Q9UP38 647 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 RIPOR2Q9Y4F9 1068 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms