RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 SLC41A1Q8IVJ1 513 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 ARRDC4Q8NCT1 418 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 RTF1Q92541 710 aaKnown RBP7.04□□□□□ -1.28
RBM39-227ENST00000470563 TEKT5Q96M29 485 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 GBP4Q96PP9 640 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 PCDH18Q9HCL0 1135 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 PRDM7Q9NQW5 492 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 TMPRSS11EQ9UL52 423 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 GPR45Q9Y5Y3 372 aa7.04□□□□□ -1.28
RBM39-227ENST00000470563 BAZ1AQ9NRL2 1556 aaPredicted RBP7.03□□□□□ -1.28
RBM39-227ENST00000470563 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 PRAMEF25A6NGN4 478 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 H2AFYO75367 372 aaKnown RBP7.03□□□□□ -1.28
RBM39-227ENST00000470563 MYL1P05976 194 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 MMEP08473 750 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 PF4V1P10720 104 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 SLC5A3P53794 718 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 ROM1Q03395 351 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 ODF1Q14990 250 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 ZNF792Q3KQV3 632 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 RPTNQ6XPR3 784 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 AMIGO3Q86WK7 504 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 ABHD4Q8TB40 342 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 JADE3Q92613 823 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 RUNDC1Q96C34 613 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 TOE1Q96GM8 510 aaKnown RBP7.03□□□□□ -1.28
RBM39-227ENST00000470563 SLC39A13Q96H72 371 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 PITHD1Q9GZP4 211 aaPredicted RBP7.03□□□□□ -1.28
RBM39-227ENST00000470563 RNF38Q9H0F5 515 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 OBP2AQ9NY56 170 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 INVSQ9Y283 1065 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 PPP2R3BQ9Y5P8 575 aa7.03□□□□□ -1.28
RBM39-227ENST00000470563 EIF4G1Q04637 1599 aaKnown RBP7.03□□□□□ -1.28
RBM39-227ENST00000470563 ELL2O00472 640 aaPredicted RBP7.02□□□□□ -1.29
RBM39-227ENST00000470563 MAFGO15525 162 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
RBM39-227ENST00000470563 LRG1P02750 347 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 KRT18P05783 430 aaKnown RBP7.02□□□□□ -1.29
RBM39-227ENST00000470563 PFKMP08237 780 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 WASP42768 502 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 BCAR1P56945 870 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 UGT8Q16880 541 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.02□□□□□ -1.29
RBM39-227ENST00000470563 CD276Q5ZPR3 534 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 OLFML2BQ68BL8 750 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 ATG4DQ86TL0 474 aaPredicted RBP7.02□□□□□ -1.29
RBM39-227ENST00000470563 PROSER1Q86XN7 944 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 CMIPQ8IY22 773 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 FAM43AQ8N2R8 423 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
RBM39-227ENST00000470563 HAPLN2Q9GZV7 340 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 RNF32Q9H0A6 362 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 CSRNP2Q9H175 543 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 MS4A5Q9H3V2 200 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 C19orf44Q9H6X5 657 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 SIT1Q9Y3P8 196 aa7.02□□□□□ -1.29
RBM39-227ENST00000470563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 ZC3H12DA2A288 527 aaKnown RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 PLEKHD1A6NEE1 506 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 ZNF839A8K0R7 811 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 F8W031 263 aaPredicted RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 PLIN1O60240 522 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 PRPF6O94906 941 aaKnown RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 CT47B1P0C2W7 299 aaPredicted RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 TRIM27P14373 513 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 FBLN1P23142 703 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 PTGS1P23219 599 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 SSTR4P31391 388 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 HTRA3P83110 453 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 MYBPC3Q14896 1274 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 STILQ15468 1287 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 MUM1Q2TAK8 710 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 PLEKHN1Q494U1 663 aaPredicted RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 PITRM1Q5JRX3 1037 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 ZBTB41Q5SVQ8 909 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 GJC2Q5T442 439 aaPredicted RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 CYB5RLQ6IPT4 315 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 TEPPQ6URK8 271 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 B3GNT9Q6UX72 402 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 CBLL1Q75N03 491 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 CALML6Q8TD86 181 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 AUTS2Q8WXX7 1259 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 PAWRQ96IZ0 340 aaKnown RBP7.01□□□□□ -1.29
RBM39-227ENST00000470563 NMRK2Q9NPI5 230 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 KLHL14Q9P2G3 628 aa7.01□□□□□ -1.29
RBM39-227ENST00000470563 ENO2P09104 434 aaPredicted RBP7□□□□□ -1.29
RBM39-227ENST00000470563 TMEM253P0C7T8 217 aa7□□□□□ -1.29
RBM39-227ENST00000470563 HSPA6P17066 643 aa7□□□□□ -1.29
RBM39-227ENST00000470563 HDAC1Q13547 482 aaPredicted RBP7□□□□□ -1.29
RBM39-227ENST00000470563 LRP8Q14114 963 aa7□□□□□ -1.29
RBM39-227ENST00000470563 MAP9Q49MG5 647 aa7□□□□□ -1.29
RBM39-227ENST00000470563 ATAT1Q5SQI0 421 aa7□□□□□ -1.29
RBM39-227ENST00000470563 ZC3H14Q6PJT7 736 aaKnown RBP7□□□□□ -1.29
RBM39-227ENST00000470563 ETV3LQ6ZN32 361 aa7□□□□□ -1.29
RBM39-227ENST00000470563 CXXC5Q7LFL8 322 aaKnown RBP7□□□□□ -1.29
RBM39-227ENST00000470563 LYSMD2Q8IV50 215 aa7□□□□□ -1.29
RBM39-227ENST00000470563 TPH2Q8IWU9 490 aa7□□□□□ -1.29
RBM39-227ENST00000470563 TP53INP2Q8IXH6 220 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms