RNA–Protein interactions for RNA: ENST00000470441.1

IFRD1-212, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2

Gene IFRD1, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-212ENST00000470441 ZSWIM3Q96MP5 696 aa6.75□□□□□ -1.33
IFRD1-212ENST00000470441 PUS7Q96PZ0 661 aaKnown RBP6.75□□□□□ -1.33
IFRD1-212ENST00000470441 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
IFRD1-212ENST00000470441 TOPAZ1Q8N9V7 1692 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 POLR3AO14802 1390 aaPredicted RBP6.74□□□□□ -1.33
IFRD1-212ENST00000470441 BRD4O60885 1362 aaPredicted RBP6.74□□□□□ -1.33
IFRD1-212ENST00000470441 TCRBV5S2A0A599 114 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 LCP1P13796 627 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 TNFRSF1AP19438 455 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 GFRA1P56159 465 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 EMC4Q5J8M3 183 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 ZNF772Q68DY9 489 aaPredicted RBP6.74□□□□□ -1.33
IFRD1-212ENST00000470441 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
IFRD1-212ENST00000470441 PLEKHH3Q7Z736 793 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 ARRDC4Q8NCT1 418 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 C8orf37Q96NL8 207 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 CLIC6Q96NY7 704 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 C1QTNF3Q9BXJ4 246 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 L2HGDHQ9H9P8 463 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 CLDND1Q9NY35 253 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 PRKAG3Q9UGI9 489 aa6.74□□□□□ -1.33
IFRD1-212ENST00000470441 COL22A1Q8NFW1 1626 aaPredicted RBP6.73□□□□□ -1.33
IFRD1-212ENST00000470441 NINLQ9Y2I6 1382 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 MATN3O15232 486 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 LAMTOR5O43504 91 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 CYP7B1O75881 506 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 DGKIO75912 1065 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 SURF1Q15526 300 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 FXNQ16595 210 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 MRM1Q6IN84 353 aaKnown RBP6.73□□□□□ -1.33
IFRD1-212ENST00000470441 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 EPB41L1Q9H4G0 881 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 TERF2IPQ9NYB0 399 aa6.73□□□□□ -1.33
IFRD1-212ENST00000470441 LRP6O75581 1613 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 C1QTNF3-AMACRE9PGA6 284 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 B4GALT3O60512 393 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TADA3O75528 432 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 IL13P35225 146 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 ZXDAP98168 799 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 DENND5AQ6IQ26 1287 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 LIMS2Q7Z4I7 341 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 DVL3Q92997 716 aaPredicted RBP6.72□□□□□ -1.33
IFRD1-212ENST00000470441 YTHDC1Q96MU7 727 aaKnown RBP6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TESK2Q96S53 571 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 WRNIP1Q96S55 665 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TMEM209Q96SK2 561 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 MYOTQ9UBF9 498 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 CROTQ9UKG9 612 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TRPM3Q9HCF6 1732 aaPredicted RBP6.72□□□□□ -1.33
IFRD1-212ENST00000470441 TTC21AQ8NDW8 1320 aa6.72□□□□□ -1.33
IFRD1-212ENST00000470441 KTN1Q86UP2 1357 aaKnown RBP6.71□□□□□ -1.33
IFRD1-212ENST00000470441 USP6P35125 1406 aa6.71□□□□□ -1.34
IFRD1-212ENST00000470441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.71□□□□□ -1.34
IFRD1-212ENST00000470441 C1orf159Q96HA4 380 aa6.71□□□□□ -1.34
IFRD1-212ENST00000470441 POLR3GLQ9BT43 218 aa6.71□□□□□ -1.34
IFRD1-212ENST00000470441 ST6GALNAC2Q9UJ37 374 aa6.71□□□□□ -1.34
IFRD1-212ENST00000470441 AFF2P51816 1311 aa6.71□□□□□ -1.34
IFRD1-212ENST00000470441 ALS2Q96Q42 1657 aa6.71□□□□□ -1.34
IFRD1-212ENST00000470441 AGRPO00253 132 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 MAFKO60675 156 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 LRG1P02750 347 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 HSPA5P11021 654 aaKnown RBP6.7□□□□□ -1.34
IFRD1-212ENST00000470441 ERCC5P28715 1186 aaPredicted RBP6.7□□□□□ -1.34
IFRD1-212ENST00000470441 ETFBP38117 255 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
IFRD1-212ENST00000470441 SLC35F1Q5T1Q4 408 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 EEPD1Q7L9B9 569 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 PHOSPHO1Q8TCT1 267 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 MICAL1Q8TDZ2 1067 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 EPN3Q9H201 632 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 SLC12A5Q9H2X9 1139 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 PRDM11Q9NQV5 511 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 PPP4R1LQ9P1A2 415 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 TTC21BQ7Z4L5 1316 aa6.7□□□□□ -1.34
IFRD1-212ENST00000470441 MARF1Q9Y4F3 1742 aaKnown RBP6.7□□□□□ -1.34
IFRD1-212ENST00000470441 AKAP12Q02952 1782 aa6.69□□□□□ -1.34
IFRD1-212ENST00000470441 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
IFRD1-212ENST00000470441 TMC5Q6UXY8 1006 aa6.69□□□□□ -1.34
IFRD1-212ENST00000470441 ZCCHC14Q8WYQ9 949 aaKnown RBP6.69□□□□□ -1.34
IFRD1-212ENST00000470441 KCTD13Q8WZ19 329 aa6.69□□□□□ -1.34
IFRD1-212ENST00000470441 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.34
IFRD1-212ENST00000470441 SMOC1Q9H4F8 434 aa6.69□□□□□ -1.34
IFRD1-212ENST00000470441 FTSJ1Q9UET6 329 aa6.69□□□□□ -1.34
IFRD1-212ENST00000470441 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
IFRD1-212ENST00000470441 NPFFR2Q9Y5X5 522 aa6.69□□□□□ -1.34
IFRD1-212ENST00000470441 CPSF1Q10570 1443 aaKnown RBP6.68□□□□□ -1.34
IFRD1-212ENST00000470441 EDC4Q6P2E9 1401 aaKnown RBP6.68□□□□□ -1.34
IFRD1-212ENST00000470441 NPEPPSL1A6NEC2 478 aa6.68□□□□□ -1.34
IFRD1-212ENST00000470441 KRIT1O00522 736 aa6.68□□□□□ -1.34
IFRD1-212ENST00000470441 GJB6O95452 261 aa6.68□□□□□ -1.34
IFRD1-212ENST00000470441 PPP2R2AP63151 447 aa6.68□□□□□ -1.34
IFRD1-212ENST00000470441 MAP4K2Q12851 820 aa6.68□□□□□ -1.34
IFRD1-212ENST00000470441 SLC10A6Q3KNW5 377 aa6.68□□□□□ -1.34
IFRD1-212ENST00000470441 TRMT10BQ6PF06 316 aaKnown RBP6.68□□□□□ -1.34
IFRD1-212ENST00000470441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.68□□□□□ -1.34
IFRD1-212ENST00000470441 KCNH5Q8NCM2 988 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms