RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 TRPM7Q96QT4 1865 aa5.44□□□□□ -1.54
SF3B1-208ENST00000470268 VWA5AO00534 786 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 ZBTB5O15062 677 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 DEXIO95424 95 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 PSAPP07602 524 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CYP2C8P10632 490 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 SCG2P13521 617 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 TCF3P15923 654 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 GTF2A2P52657 109 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 GUCY1B3Q02153 619 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 GRM1Q13255 1194 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 COG2Q14746 738 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 ARTNQ5T4W7 220 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CPLX2Q6PUV4 134 aaKnown RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 FASTKD5Q7L8L6 764 aaKnown RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 FAM160B2Q86V87 743 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CHURC1Q8WUH1 139 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 BHMTQ93088 406 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 COA7Q96BR5 231 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 MDFIQ99750 246 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 ALG1Q9BT22 464 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 ASCC2Q9H1I8 757 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 R3HDMLQ9H3Y0 253 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 SLC38A10Q9HBR0 1119 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 TXNRD2Q9NNW7 524 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 VPS54Q9P1Q0 977 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 SALL4Q9UJQ4 1053 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 KCNJ14Q9UNX9 436 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 RIPK3Q9Y572 518 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 PTPRFP10586 1907 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 STXBP3O00186 592 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 PDHXO00330 501 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 DYRK3O43781 588 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 AOC2O75106 756 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CNMDO75829 334 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 KIF4AO95239 1232 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CETPP11597 493 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 PLAURQ03405 335 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 TMEM132BQ14DG7 1078 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 TSNAXIP1Q2TAA8 658 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 DEFB115Q30KQ5 88 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 KIAA0319Q5VV43 1072 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 LARP1BQ659C4 914 aaKnown RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 KRT40Q6A162 431 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CCDC174Q6PII3 467 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 LBX2Q6XYB7 198 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 HEATR3Q7Z4Q2 680 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 FAM184AQ8NB25 1140 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 FBXO18Q8NFZ0 1043 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 RRP36Q96EU6 259 aaKnown RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CAPNS2Q96L46 248 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 CWC22Q9HCG8 908 aaKnown RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 RAVER2Q9HCJ3 691 aaKnown RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 NPHS2Q9NP85 383 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 ZFP64Q9NPA5 681 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 BARHL2Q9NY43 387 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 BTBD7Q9P203 1132 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 ZNF214Q9UL59 606 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-208ENST00000470268 MTMR6Q9Y217 621 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 LOC285556D6RIA3 1793 aa5.43□□□□□ -1.54
SF3B1-208ENST00000470268 RLFQ13129 1914 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 MANSC4A6NHS7 340 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-208ENST00000470268 KIF28PB7ZC32 967 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 STX6O43752 255 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 NRLP54845 237 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 HERVK_113P62684 666 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 AKAP17AQ02040 695 aaKnown RBP5.42□□□□□ -1.54
SF3B1-208ENST00000470268 KIF23Q02241 960 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-208ENST00000470268 USH1GQ495M9 461 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 ANKRD23Q86SG2 305 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 SYT9Q86SS6 491 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 CPXCR1Q8N123 301 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 PHF20Q9BVI0 1012 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 OSBPL7Q9BZF2 842 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 C12orf49Q9H741 205 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 TPSG1Q9NRR2 321 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 HOXC10Q9NYD6 342 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 RBPJLQ9UBG7 517 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 VTI1BQ9UEU0 232 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 SEC63Q9UGP8 760 aaKnown RBP5.42□□□□□ -1.54
SF3B1-208ENST00000470268 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 CEP350Q5VT06 3117 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 MYPNQ86TC9 1320 aa5.42□□□□□ -1.54
SF3B1-208ENST00000470268 VPS37CA5D8V6 355 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-208ENST00000470268 BTBD18B2RXH4 712 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 SCAMP3O14828 347 aaKnown RBP5.41□□□□□ -1.54
SF3B1-208ENST00000470268 MMP1P03956 469 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 ICAM1P05362 532 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 EIF4BP23588 611 aaKnown RBP5.41□□□□□ -1.54
SF3B1-208ENST00000470268 TM4SF4P48230 202 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 IRX3P78415 501 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-208ENST00000470268 HYAL2Q12891 473 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 PCSK7Q16549 785 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 EARS2Q5JPH6 523 aaKnown RBP5.41□□□□□ -1.54
SF3B1-208ENST00000470268 FAM173BQ6P4H8 233 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 FERMT3Q86UX7 667 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 FBXO11Q86XK2 927 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 TBC1D5Q92609 795 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 CRELD1Q96HD1 420 aa5.41□□□□□ -1.54
SF3B1-208ENST00000470268 C8orf76Q96K31 380 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms