RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 HIPK4Q8NE63 616 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 DLG3Q92796 817 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 CDK5RAP1Q96SZ6 601 aaKnown RBP8.03□□□□□ -1.12
COL11A1-208ENST00000470170 OR10A5Q9H207 317 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 FBXO10Q9UK96 956 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 ZFR2Q9UPR6 939 aaKnown RBP8.03□□□□□ -1.12
COL11A1-208ENST00000470170 IRF9Q00978 393 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 TBR1Q16650 682 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 WDR48Q8TAF3 677 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 SCYL1Q96KG9 808 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 CLUHP3Q96NS8 147 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 DPYSL5Q9BPU6 564 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 NR2E1Q9Y466 385 aa8.02□□□□□ -1.13
COL11A1-208ENST00000470170 PLD2O14939 933 aa8.01□□□□□ -1.13
COL11A1-208ENST00000470170 MUSKO15146 869 aa8.01□□□□□ -1.13
COL11A1-208ENST00000470170 HIP1RO75146 1068 aa8.01□□□□□ -1.13
COL11A1-208ENST00000470170 EIF4HQ15056 248 aaKnown RBP8.01□□□□□ -1.13
COL11A1-208ENST00000470170 CATSPEREQ5SY80 951 aa8.01□□□□□ -1.13
COL11A1-208ENST00000470170 ERCC4Q92889 916 aaPredicted RBP8.01□□□□□ -1.13
COL11A1-208ENST00000470170 OAZ3Q9UMX2 235 aa8.01□□□□□ -1.13
COL11A1-208ENST00000470170 ASB1Q9Y576 335 aa8.01□□□□□ -1.13
COL11A1-208ENST00000470170 MATN2O00339 956 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 KRT37O76014 449 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 NPTXRO95502 500 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 ZBTB48P10074 688 aaPredicted RBP8□□□□□ -1.13
COL11A1-208ENST00000470170 SDHAP31040 664 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 SQSTM1Q13501 440 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 MOGSQ13724 837 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 NFE2L2Q16236 605 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 SPDYAQ5MJ70 313 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 TMEM200BQ69YZ2 307 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 FUKQ8N0W3 1084 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 KANSL2Q9H9L4 492 aa8□□□□□ -1.13
COL11A1-208ENST00000470170 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 M0R2C6 588 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 ARHGAP6O43182 974 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 CDC14BO60729 498 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 CR2P20023 1033 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 PCOLCEQ15113 449 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 AGBL4Q5VU57 503 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 FILIP1Q7Z7B0 1213 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 BOCQ9BWV1 1114 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 Q9UFV3 132 aa7.99□□□□□ -1.13
COL11A1-208ENST00000470170 GOLGA6L22H0YM25 854 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 GLRX3O76003 335 aaKnown RBP7.98□□□□□ -1.13
COL11A1-208ENST00000470170 MRE11P49959 708 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 MECP2P51608 486 aaKnown RBP7.98□□□□□ -1.13
COL11A1-208ENST00000470170 STAT5BP51692 787 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 TRIM68Q6AZZ1 485 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 GRAMD4Q6IC98 578 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 ZCCHC8Q6NZY4 707 aaKnown RBP7.98□□□□□ -1.13
COL11A1-208ENST00000470170 OTOP1Q7RTM1 612 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 C12orf65Q9H3J6 166 aaKnown RBP7.98□□□□□ -1.13
COL11A1-208ENST00000470170 SAMD15Q9P1V8 674 aa7.98□□□□□ -1.13
COL11A1-208ENST00000470170 C6P13671 934 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 IGFALSP35858 605 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 NFYCQ13952 458 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 ZNF460Q14592 562 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 HS1BP3Q53T59 392 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 USP30Q70CQ3 517 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 DDX53Q86TM3 631 aaKnown RBP7.97□□□□□ -1.13
COL11A1-208ENST00000470170 RTKN2Q8IZC4 609 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 CFHR4Q92496 578 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 FOXRED1Q96CU9 486 aaPredicted RBP7.97□□□□□ -1.13
COL11A1-208ENST00000470170 MRFAP1L1Q96HT8 127 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 OR14A2Q96R54 314 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 ADOQ96SZ5 270 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 SEMA4AQ9H3S1 761 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 ZSWIM4Q9H7M6 989 aa7.97□□□□□ -1.13
COL11A1-208ENST00000470170 AKAP8O43823 692 aaKnown RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 DNAJC8O75937 253 aaPredicted RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 RAD17O75943 681 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 COMTP21964 271 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 MEOX1P50221 254 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 DUSP8Q13202 625 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 FNDC3BQ53EP0 1204 aaKnown RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 CC2D1AQ6P1N0 951 aaPredicted RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 OR14K1Q8NGZ2 314 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 CALML6Q8TD86 181 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 SH3TC2Q8TF17 1288 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 PLA2G12BQ9BX93 195 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 PUF60Q9UHX1 559 aaKnown RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 FAM184BQ9ULE4 1060 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 TESMINQ9Y4I5 508 aa7.96□□□□□ -1.14
COL11A1-208ENST00000470170 TNPO3Q9Y5L0 923 aaKnown RBP7.96□□□□□ -1.14
COL11A1-208ENST00000470170 DVL2O14641 736 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 PPP1R12AO14974 1030 aaPredicted RBP7.95□□□□□ -1.14
COL11A1-208ENST00000470170 OPA1O60313 960 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 FSHBP01225 129 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 TACR2P21452 398 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 APEX1P27695 318 aaKnown RBP7.95□□□□□ -1.14
COL11A1-208ENST00000470170 KIF11P52732 1056 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 Q8N1X5 172 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 CHST14Q8NCH0 376 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 ZNF747Q9BV97 191 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 OR10A2Q9H208 303 aa7.95□□□□□ -1.14
COL11A1-208ENST00000470170 B4E1Z4 1266 aa7.94□□□□□ -1.14
COL11A1-208ENST00000470170 AMHP03971 560 aa7.94□□□□□ -1.14
COL11A1-208ENST00000470170 ALDH6A1Q02252 535 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms