RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 CIR1Q86X95 450 aaPredicted RBP6.58□□□□□ -1.36
VPS8-219ENST00000469479 MIB1Q86YT6 1006 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 DNERQ8NFT8 737 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 TRAIPQ9BWF2 469 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 AP5M1Q9H0R1 490 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 NGRNQ9NPE2 291 aaKnown RBP6.58□□□□□ -1.36
VPS8-219ENST00000469479 TERF2IPQ9NYB0 399 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 ZNF214Q9UL59 606 aaPredicted RBP6.58□□□□□ -1.36
VPS8-219ENST00000469479 CD163L1Q9NR16 1453 aa6.58□□□□□ -1.36
VPS8-219ENST00000469479 KDM6AO15550 1401 aaPredicted RBP6.58□□□□□ -1.36
VPS8-219ENST00000469479 MEGF6O75095 1541 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 C2orf71A6NGG8 1288 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 B4GALT3O60512 393 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 MAP2K1Q02750 393 aaPredicted RBP6.57□□□□□ -1.36
VPS8-219ENST00000469479 CPNE8Q86YQ8 564 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 KIAA0825Q8IV33 1275 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS8-219ENST00000469479 MCMBPQ9BTE3 642 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 FAM86C1Q9NVL1 165 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 BACE2Q9Y5Z0 518 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 TAF1LQ8IZX4 1826 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 LTN1O94822 1766 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
VPS8-219ENST00000469479 MON2Q7Z3U7 1717 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 UBR3Q6ZT12 1888 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 ARFGEF1Q9Y6D6 1849 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 STXBP3O00186 592 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 FUCA1P04066 466 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 TGM1P22735 817 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 GUCY2CP25092 1073 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 AMPHP49418 695 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 ITGA1P56199 1179 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 TAGLNQ01995 201 aaKnown RBP6.56□□□□□ -1.36
VPS8-219ENST00000469479 NME9Q86XW9 330 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 LTV1Q96GA3 475 aaPredicted RBP6.56□□□□□ -1.36
VPS8-219ENST00000469479 FERD3LQ96RJ6 166 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 GBP3Q9H0R5 595 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 SIT1Q9Y3P8 196 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 HS3ST3A1Q9Y663 406 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 KIAA1551Q9HCM1 1747 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 TOGARAM1Q9Y4F4 1720 aa6.56□□□□□ -1.36
VPS8-219ENST00000469479 C7orf72A4D263 438 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 CBFA2T2O43439 604 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 CYP1A1P04798 512 aaPredicted RBP6.55□□□□□ -1.36
VPS8-219ENST00000469479 KCNA3P22001 575 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 HOXC9P31274 260 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 RFC4P35249 363 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 ZYXQ15942 572 aaKnown RBP6.55□□□□□ -1.36
VPS8-219ENST00000469479 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 RBBP8NLQ8NC74 664 aaPredicted RBP6.55□□□□□ -1.36
VPS8-219ENST00000469479 SYT3Q9BQG1 590 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 SPON2Q9BUD6 331 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 TCAF1Q9Y4C2 921 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 KIF24Q5T7B8 1368 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 RAB3GAP2Q9H2M9 1393 aa6.55□□□□□ -1.36
VPS8-219ENST00000469479 C4AP0C0L4 1744 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 IQCA1LA6NCM1 817 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 GPR42O15529 346 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 PPM1BO75688 479 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 ERCC3P19447 782 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 SELENOPP49908 381 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 LBX1P52954 281 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 EPHB4P54760 987 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 PPP2CBP62714 309 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 PPP2CAP67775 309 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 AMPD2Q01433 879 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 DPY19L1Q2PZI1 675 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 PRAMEF18Q5VWM3 479 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 STK32CQ86UX6 486 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 ADCY4Q8NFM4 1077 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 PLEKHO2Q8TD55 490 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 SEC14L1Q92503 715 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 COG3Q96JB2 828 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 PUS7Q96PZ0 661 aaKnown RBP6.54□□□□□ -1.36
VPS8-219ENST00000469479 HAUS7Q99871 368 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 TMOD3Q9NYL9 352 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 TESMINQ9Y4I5 508 aa6.54□□□□□ -1.36
VPS8-219ENST00000469479 CCDC85CA6NKD9 419 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 CA12O43570 354 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 VAMP4O75379 141 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 GYS1P13807 737 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 ZNF28P17035 718 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 GRB10Q13322 594 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 HEATR6Q6AI08 1181 aaKnown RBP6.53□□□□□ -1.36
VPS8-219ENST00000469479 ZNF585AQ6P3V2 769 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 PIGBQ92521 554 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 TMEM168Q9H0V1 697 aa6.53□□□□□ -1.36
VPS8-219ENST00000469479 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
VPS8-219ENST00000469479 N4BP2Q86UW6 1770 aaPredicted RBP6.52□□□□□ -1.37
VPS8-219ENST00000469479 MUSKO15146 869 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 SGSM2O43147 1006 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 RPS6KA4O75676 772 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 CYP7B1O75881 506 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 HSPA8P11142 646 aaKnown RBP6.52□□□□□ -1.37
VPS8-219ENST00000469479 KLF10Q13118 480 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 ARHGEF18Q6ZSZ5 1173 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 PALM2Q8IXS6 379 aa6.52□□□□□ -1.37
VPS8-219ENST00000469479 FAM126BQ8IXS8 530 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms