RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, human

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPR-204	ENST00000469463	FEZ1	Q99689	392 aa		4.59	□□□□□ -1.67
TPR-204	ENST00000469463	CELF4	Q9BZC1	486 aa	Known RBP	4.59	□□□□□ -1.67
TPR-204	ENST00000469463	KATNBL1	Q9H079	304 aa		4.59	□□□□□ -1.67
TPR-204	ENST00000469463	CABP5	Q9NP86	173 aa		4.59	□□□□□ -1.67
TPR-204	ENST00000469463	KCND1	Q9NSA2	647 aa		4.59	□□□□□ -1.67
TPR-204	ENST00000469463	ARHGAP20	Q9P2F6	1191 aa		4.59	□□□□□ -1.67
TPR-204	ENST00000469463	ZFP69B	Q9UJL9	534 aa		4.59	□□□□□ -1.67
TPR-204	ENST00000469463	TCRBV5S4A2T	A0A5A2	114 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	SLC12A8	A0AV02	714 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ZNF561-AS1	K7EIQ3	104 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	MAN2B1	O00754	1011 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	CUTA	O60888	179 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	GLRX3	O76003	335 aa	Known RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	CLSTN1	O94985	981 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ENO2	P09104	434 aa	Predicted RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	PTPN1	P18031	435 aa	Known RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	SDS	P20132	328 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	CSF2RB	P32927	897 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	GLRB	P48167	497 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ABHD18	Q0P651	414 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	FOXE3	Q13461	319 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	USP10	Q14694	798 aa	Known RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	TMEM132B	Q14DG7	1078 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	SKIDA1	Q1XH10	827 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	CFAP100	Q494V2	611 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	SDE2	Q6IQ49	451 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	TCTN3	Q6NUS6	607 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ABHD17C	Q6PCB6	329 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	RNF207	Q6ZRF8	634 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	SH3RF2	Q8TEC5	729 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ERCC4	Q92889	916 aa	Predicted RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	PCIF1	Q9H4Z3	704 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	MSL2	Q9HCI7	577 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	ZFR2	Q9UPR6	939 aa	Known RBP	4.58	□□□□□ -1.68
TPR-204	ENST00000469463	TBX22	Q9Y458	520 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	TELO2	Q9Y4R8	837 aa		4.58	□□□□□ -1.68
TPR-204	ENST00000469463	WDR33	Q9C0J8	1336 aa	Known RBP	4.57	□□□□□ -1.68
TPR-204	ENST00000469463		H0Y858	1186 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	FOXS1	O43638	330 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	AMY2A	P04746	511 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	CKM	P06732	381 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	AMY2B	P19961	511 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	COMT	P21964	271 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	GJA4	P35212	333 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	IRF9	Q00978	393 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	FHL2	Q14192	279 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	HABP4	Q5JVS0	413 aa	Known RBP	4.57	□□□□□ -1.68
TPR-204	ENST00000469463	CD276	Q5ZPR3	534 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	AMER2	Q8N7J2	671 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	HIPK4	Q8NE63	616 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	NINJ1	Q92982	152 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	MFSD3	Q96ES6	412 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	NEIL1	Q96FI4	390 aa	Predicted RBP	4.57	□□□□□ -1.68
TPR-204	ENST00000469463	WNK4	Q96J92	1243 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	LRRC37B	Q96QE4	947 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	ADO	Q96SZ5	270 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	SMURF1	Q9HCE7	757 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	SLC39A2	Q9NP94	309 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	PLAA	Q9Y263	795 aa		4.57	□□□□□ -1.68
TPR-204	ENST00000469463	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.56	□□□□□ -1.68
TPR-204	ENST00000469463	TLDC2	A0PJX2	215 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	ENPP3	O14638	875 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	WNT9A	O14904	365 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	GAS7	O60861	476 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	MCM7	P33993	719 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	RAC3	P60763	192 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	SART3	Q15020	963 aa	Known RBP	4.56	□□□□□ -1.68
TPR-204	ENST00000469463	ZMAT1	Q5H9K5	638 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	OVCH1	Q7RTY7	1134 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	GPR155	Q7Z3F1	870 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	LRRTM3	Q86VH5	581 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	TAX1BP1	Q86VP1	789 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	CHST14	Q8NCH0	376 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	WDR48	Q8TAF3	677 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	ZNF503	Q96F45	646 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	GNRHR2	Q96P88	292 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	CARD11	Q9BXL7	1154 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	ZKSCAN5	Q9Y2L8	839 aa		4.56	□□□□□ -1.68
TPR-204	ENST00000469463	PTPDC1	A2A3K4	754 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	FAM90A27P	A6NNH2	459 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	ZNF839	A8K0R7	811 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	NPIPB8	E9PQR5	432 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463		H7C1D1	291 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	KCNQ2	O43526	872 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	NPTXR	O95502	500 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	MME	P08473	750 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	MYCLP1	P12525	358 aa	Predicted RBP	4.55	□□□□□ -1.68
TPR-204	ENST00000469463	POLD1	P28340	1107 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	MC4R	P32245	332 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	EPHA5	P54756	1037 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	PFKP	Q01813	784 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	ZNF174	Q15697	407 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	NRN1L	Q496H8	165 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.55	□□□□□ -1.68
TPR-204	ENST00000469463	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.55	□□□□□ -1.68
TPR-204	ENST00000469463	FSTL4	Q6MZW2	842 aa		4.55	□□□□□ -1.68
TPR-204	ENST00000469463	DPP8	Q6V1X1	898 aa	Predicted RBP	4.55	□□□□□ -1.68
TPR-204	ENST00000469463	POLN	Q7Z5Q5	900 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms