RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
VARS2-205ENST00000469358 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 FGGP02679 453 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
VARS2-205ENST00000469358 KNOP1Q1ED39 458 aaKnown RBP13.18□□□□□ -0.3
VARS2-205ENST00000469358 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 NT5C3AQ9H0P0 336 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 CHMP2AO43633 222 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 BUB1BO60566 1050 aaPredicted RBP13.18□□□□□ -0.3
VARS2-205ENST00000469358 GNA14O95837 355 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 GALCP54803 685 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 ORC2Q13416 577 aaPredicted RBP13.18□□□□□ -0.3
VARS2-205ENST00000469358 PLS1Q14651 629 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 EPHA7Q15375 998 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 LNX1Q8TBB1 728 aaPredicted RBP13.18□□□□□ -0.3
VARS2-205ENST00000469358 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.33e-9■■■■□ 26.7
VARS2-205ENST00000469358 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
VARS2-205ENST00000469358 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
VARS2-205ENST00000469358 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 HMGB1P1B2RPK0 211 aaPredicted RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 NR3C1P04150 777 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 SHBGP04278 402 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 CD302Q8IX05 232 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 SLC35C1Q96A29 364 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 KCNMB3Q9NPA1 279 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 ASTN1O14525 1302 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 EML1O00423 815 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 H2AFZP0C0S5 128 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 IL1R1P14778 569 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 PLCG2P16885 1265 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 MARSP56192 900 aaKnown RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 UBXN2AP68543 259 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 CTTNQ14247 550 aaKnown RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 H2AFVQ71UI9 128 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 GOPCQ9HD26 462 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 FAM107AO95990 144 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 ACTN3Q08043 901 aaPredicted RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 ARHGAP44Q17R89 818 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 DCAF12L1Q5VU92 463 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 NT5DC3Q86UY8 548 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 CCDC13Q8IYE1 715 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 PRPF38AQ8NAV1 312 aaKnown RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 ARHGEF26Q96DR7 871 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
VARS2-205ENST00000469358 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
VARS2-205ENST00000469358 GAKO14976 1311 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 TLDC2A0PJX2 215 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 MEIS2O14770 477 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 PDE4CQ08493 712 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
VARS2-205ENST00000469358 HYIQ5T013 277 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
VARS2-205ENST00000469358 DNM1LO00429 736 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 EVI5O60447 810 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 ACTRT1Q8TDG2 376 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 OSBPL7Q9BZF2 842 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 CDK5RAP2Q96SN8 1893 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 TMEM110-MUSTN1A8MSY1 372 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
VARS2-205ENST00000469358 SEPT2Q15019 361 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 EDRF1Q3B7T1 1238 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 TRMT1LQ7Z2T5 733 aaKnown RBP13.16□□□□□ -0.3
VARS2-205ENST00000469358 TMC3Q7Z5M5 1100 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 SLC35G2Q8TBE7 412 aa13.16□□□□□ -0.3
VARS2-205ENST00000469358 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 FLOT1O75955 427 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 CYP2J2P51589 502 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
VARS2-205ENST00000469358 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
VARS2-205ENST00000469358 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
VARS2-205ENST00000469358 OLIG1Q8TAK6 271 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 ETNPPLQ8TBG4 499 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 PBKQ96KB5 322 aa13.15□□□□□ -0.3
VARS2-205ENST00000469358 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms