RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 AK8Q96MA6 479 aa9.58□□□□□ -0.88
SSBP1-208ENST00000469123 CCDC43Q96MW1 224 aaKnown RBP9.58□□□□□ -0.88
SSBP1-208ENST00000469123 ZNF396Q96N95 335 aaPredicted RBP9.58□□□□□ -0.88
SSBP1-208ENST00000469123 UIMC1Q96RL1 719 aa9.58□□□□□ -0.88
SSBP1-208ENST00000469123 MAP7D2Q96T17 732 aa9.58□□□□□ -0.88
SSBP1-208ENST00000469123 EIF2AK1Q9BQI3 630 aaKnown RBP9.58□□□□□ -0.88
SSBP1-208ENST00000469123 TMEM60Q9H2L4 133 aa9.58□□□□□ -0.88
SSBP1-208ENST00000469123 ANKEF1Q9NU02 776 aa9.58□□□□□ -0.88
SSBP1-208ENST00000469123 ATP6V1DQ9Y5K8 247 aa9.58□□□□□ -0.88
SSBP1-208ENST00000469123 POTEMA6NI47 508 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 ZBTB42B2RXF5 422 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 WNT7AO00755 349 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 C22orf31O95567 290 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 CSF2RAP15509 400 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 ITGB8P26012 769 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 YWHABP31946 246 aaKnown RBP9.57□□□□□ -0.88
SSBP1-208ENST00000469123 TECP42680 631 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 IGBP1P78318 339 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 ZNF200P98182 395 aaPredicted RBP9.57□□□□□ -0.88
SSBP1-208ENST00000469123 TARBP2Q15633 366 aaKnown RBP9.57□□□□□ -0.88
SSBP1-208ENST00000469123 UGCGQ16739 394 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 TET1Q8NFU7 2136 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 TCP11Q8WWU5 503 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 NACC1Q96RE7 527 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 NT5C3AQ9H0P0 336 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 WNT8AQ9H1J5 351 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 LRWD1Q9UFC0 647 aa9.57□□□□□ -0.88
SSBP1-208ENST00000469123 SEPT9Q9UHD8 586 aaPredicted RBP9.57□□□□□ -0.88
SSBP1-208ENST00000469123 IGKV6-21A0A0C4DH24 114 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 DGAT1O75907 488 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 SLITRK3O94933 977 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 FGBP02675 491 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 ZSCAN22P10073 491 aaPredicted RBP9.56□□□□□ -0.88
SSBP1-208ENST00000469123 LONP1P36776 959 aaKnown RBP9.56□□□□□ -0.88
SSBP1-208ENST00000469123 CCL23P55773 120 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 MRPS6P82932 125 aaKnown RBP9.56□□□□□ -0.88
SSBP1-208ENST00000469123 HIC1Q14526 733 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 LRIT3Q3SXY7 679 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 ZNF618Q5T7W0 954 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 CNKSR3Q6P9H4 555 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 ANO5Q75V66 913 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 FERMT3Q86UX7 667 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 TPH2Q8IWU9 490 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 HERVK_113Q902F9 699 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 SEPT8Q92599 483 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 DYDC2Q96IM9 177 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 CEP170P1Q96L14 293 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 RNF216Q9NWF9 866 aaPredicted RBP9.56□□□□□ -0.88
SSBP1-208ENST00000469123 DBR1Q9UK59 544 aaKnown RBP9.56□□□□□ -0.88
SSBP1-208ENST00000469123 CFAP45Q9UL16 551 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 TRPV2Q9Y5S1 764 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 SCN5AQ14524 2016 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 UMODL1Q5DID0 1318 aa9.56□□□□□ -0.88
SSBP1-208ENST00000469123 ABHD14A-ACY1A0A1B0GW23 586 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 ASAP2O43150 1006 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 STBD1O95210 358 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 YEATS4O95619 227 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 F13A1P00488 732 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 ANP32AP39687 249 aaKnown RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 TXLNAP40222 546 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 NASPP49321 788 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 POLGP54098 1239 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 CYP4A11Q02928 519 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 MGAT3Q09327 533 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 CTTNQ14247 550 aaKnown RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 NBR1Q14596 966 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 PCBP1Q15365 356 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 MTERF2Q49AM1 385 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 TMEM240Q5SV17 173 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 EFCAB12Q6NXP0 572 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 TRAF7Q6Q0C0 670 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 RUFY4Q6ZNE9 571 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 TSHZ1Q6ZSZ6 1077 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 ZNF410Q86VK4 478 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 KIAA0319LQ8IZA0 1049 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 METTL13Q8N6R0 699 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 LINC01465Q8N7H1 131 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 MCPH1Q8NEM0 835 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 PHOSPHO2Q8TCD6 241 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 DNAJB3Q8WWF6 145 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 SCLYQ96I15 445 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 RNPC3Q96LT9 517 aaKnown RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 FTHL17Q9BXU8 183 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 CELF4Q9BZC1 486 aaKnown RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 INO80BQ9C086 356 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 FTOQ9C0B1 505 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 FAM49AQ9H0Q0 323 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 DHX33Q9H6R0 707 aaKnown RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 ATP6V0A4Q9HBG4 840 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 RGL1Q9NZL6 768 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 COLQQ9Y215 455 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-208ENST00000469123 MICAL3Q7RTP6 2002 aa9.55□□□□□ -0.88
SSBP1-208ENST00000469123 VWA3AA6NCI4 1184 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms