RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 PPP1R18Q6NYC8 613 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 FAM43BQ6ZT52 329 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 HFE2Q6ZVN8 426 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 RBM23Q86U06 439 aaKnown RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 TMEM40Q8WWA1 233 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 PPP2R3CQ969Q6 453 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 PCDHB7Q9Y5E2 793 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 PCDHGC5Q9Y5F6 944 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 RPS6KA5O75582 802 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 IBSPP21815 317 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-207ENST00000469093 NRIP1P48552 1158 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 COASYQ13057 564 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 TSGA10IPQ3SY00 556 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF484Q5JVG2 852 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 FAM102BQ5T8I3 360 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 SWSAP1Q6NVH7 229 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 PLA2G4DQ86XP0 818 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 CCDC60Q8IWA6 550 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-207ENST00000469093 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-207ENST00000469093 CRYGNQ8WXF5 182 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 FBXL18Q96ME1 805 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 ADAM2Q99965 735 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 GLT8D2Q9H1C3 349 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF302Q9NR11 478 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 ST3GAL5Q9UNP4 418 aa13.94□□□□□ -0.18
COL5A1-207ENST00000469093 TECTAO75443 2155 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 IGLV3-22A0A075B6J6 115 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 C9IYK1 514 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 ADAMTS3O15072 1205 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 GPR182O15218 404 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 GLP2RO95838 553 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 CYP3A4P08684 503 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 CDC27P30260 824 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 FAM189BP81408 668 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 SLC24A5Q71RS6 500 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 SMRP1Q8NCR6 262 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 EDAQ92838 391 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 KCNH6Q9H252 994 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 TLE6Q9H808 572 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 C1orf112Q9NSG2 853 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 PCDHB12Q9Y5F1 795 aa13.93□□□□□ -0.18
COL5A1-207ENST00000469093 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-207ENST00000469093 LOXHD1Q8IVV2 1947 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF318Q5VUA4 2279 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 DENND3A2RUS2 1198 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 TBKBP1A7MCY6 615 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
COL5A1-207ENST00000469093 PER2O15055 1255 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
COL5A1-207ENST00000469093 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-207ENST00000469093 ERVFC1P60507 584 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 UBE3AQ05086 875 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 PFKFB3Q16875 520 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-207ENST00000469093 MFSD14AQ96MC6 490 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 TYW1Q9NV66 732 aaKnown RBP13.92□□□□□ -0.18
COL5A1-207ENST00000469093 BARX2Q9UMQ3 279 aaPredicted RBP13.92□□□□□ -0.18
COL5A1-207ENST00000469093 COL1A2P08123 1366 aa13.92□□□□□ -0.18
COL5A1-207ENST00000469093 C5orf42Q9H799 3197 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 GOLGA8BA8MQT2 603 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 LOC730098B7Z3J9 87 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 GPR32O75388 356 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 FGF18O76093 207 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 C22orf31O95567 290 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
COL5A1-207ENST00000469093 NHLH1Q02575 133 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 BMP2KLQ5H9B9 411 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
COL5A1-207ENST00000469093 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
COL5A1-207ENST00000469093 FAM228AQ86W67 206 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 CKAP2LQ8IYA6 745 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-207ENST00000469093 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 OSMRQ99650 979 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF577Q9BSK1 485 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 TBC1D22BQ9NU19 505 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-207ENST00000469093 HCSTQ9UBK5 93 aa13.91□□□□□ -0.18
COL5A1-207ENST00000469093 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms