RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SMC1BQ8NDV3 1235 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 CNOT6LQ96LI5 555 aaKnown RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 TIPINQ9BVW5 301 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 KCNF1Q9H3M0 494 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ZNF302Q9NR11 478 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 CPA4Q9UI42 421 aa20.97■□□□□ 0.95
SMC4-209ENST00000468653 ABT1Q9ULW3 272 aaKnown RBP20.97■□□□□ 0.95
SMC4-209ENST00000468653 SYNGAP1Q96PV0 1343 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 TEX33O43247 280 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 PRPF6O94906 941 aaKnown RBP20.96■□□□□ 0.95
SMC4-209ENST00000468653 INHBEP58166 350 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 FKBP3Q00688 224 aaKnown RBP20.96■□□□□ 0.95
SMC4-209ENST00000468653 PRKCEQ02156 737 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 ZCWPW2Q504Y3 356 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 SPECC1LQ69YQ0 1117 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 METTL7BQ6UX53 244 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 STXBP4Q6ZWJ1 553 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 DPP9Q86TI2 863 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 FAM178BQ8IXR5 827 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 KCTD10Q9H3F6 313 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 DDX41Q9UJV9 622 aaKnown RBP20.96■□□□□ 0.95
SMC4-209ENST00000468653 LRRC37A2A6NM11 1700 aa20.96■□□□□ 0.95
SMC4-209ENST00000468653 MTIF2P46199 727 aaKnown RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 MAPK7Q13164 816 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 KNOP1Q1ED39 458 aaKnown RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 PPP4R3CPQ6ZMV5 832 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 LRRC8AQ8IWT6 810 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 ZNF507Q8TCN5 953 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 CACTINQ8WUQ7 758 aaKnown RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 CCDC102AQ96A19 550 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 CEP170P1Q96L14 293 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 SEPT9Q9UHD8 586 aaPredicted RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 PLXNB2O15031 1838 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 PES1O00541 588 aaKnown RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 EIF3DO15371 548 aaKnown RBP eCLIP20.95■□□□□ 0.942e-16■■■■■ 56.2
SMC4-209ENST00000468653 STBD1O95210 358 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 ARIH2O95376 493 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 NMT1P30419 496 aaKnown RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 GRB14Q14449 540 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 ARID5BQ14865 1188 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 BMT2Q1RMZ1 405 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 XKR3Q5GH77 459 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 IFNL1Q8IU54 200 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 DAW1Q8N136 415 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 CCDC150Q8NCX0 1101 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 TUBGCP2Q9BSJ2 902 aa20.95■□□□□ 0.94
SMC4-209ENST00000468653 LARSQ9P2J5 1176 aaKnown RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 MAFBQ9Y5Q3 323 aaPredicted RBP20.95■□□□□ 0.94
SMC4-209ENST00000468653 IGSF9BQ9UPX0 1349 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 GSTTP1A0A1W2PQM5 241 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 KIF3CO14782 793 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 PRKCSHP14314 528 aaPredicted RBP20.94■□□□□ 0.94
SMC4-209ENST00000468653 LRMPQ12912 555 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 CELF3Q5SZQ8 465 aaKnown RBP20.94■□□□□ 0.94
SMC4-209ENST00000468653 LRRC55Q6ZSA7 311 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 ZNF467Q7Z7K2 595 aaPredicted RBP20.94■□□□□ 0.94
SMC4-209ENST00000468653 SEPT1Q8WYJ6 367 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 DRC1Q96MC2 740 aa20.94■□□□□ 0.94
SMC4-209ENST00000468653 CALUO43852 315 aaPredicted RBP20.93■□□□□ 0.94
SMC4-209ENST00000468653 TXNP10599 105 aaKnown RBP20.93■□□□□ 0.94
SMC4-209ENST00000468653 EDRF1Q3B7T1 1238 aa20.93■□□□□ 0.94
SMC4-209ENST00000468653 FAM160B1Q5W0V3 765 aa20.93■□□□□ 0.94
SMC4-209ENST00000468653 ZNF720Q7Z2F6 126 aa20.93■□□□□ 0.94
SMC4-209ENST00000468653 DHX37Q8IY37 1157 aaKnown RBP20.93■□□□□ 0.94
SMC4-209ENST00000468653 SCFD2Q8WU76 684 aa20.93■□□□□ 0.94
SMC4-209ENST00000468653 CEP63Q96MT8 703 aa20.93■□□□□ 0.94
SMC4-209ENST00000468653 IGKV6D-21A0A0A0MT36 114 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 SLC15A5A6NIM6 579 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 LGALS16A8MUM7 142 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 NOP56O00567 594 aaKnown RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 PDXKO00764 312 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 PLS3P13797 630 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 SFPQP23246 707 aaKnown RBP eCLIP20.92■□□□□ 0.94
SMC4-209ENST00000468653 HOXD13P35453 343 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 UBXN1Q04323 297 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 SREBF2Q12772 1141 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 FAM102BQ5T8I3 360 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 CCDC62Q6P9F0 684 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 FIZ1Q96SL8 496 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 PDGFCQ9NRA1 345 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 TRAF3IP3Q9Y228 551 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 PCDHB13Q9Y5F0 798 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 ADGRA2Q96PE1 1338 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 FAM155AB1AL88 458 aaPredicted RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 TCF7P36402 384 aaPredicted RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 ZC2HC1CQ53FD0 456 aaPredicted RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 NOC4LQ9BVI4 516 aaKnown RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 VTA1Q9NP79 307 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 CYP26B1Q9NR63 512 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 SLC5A4Q9NY91 659 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 DIS3Q9Y2L1 958 aaKnown RBP20.92■□□□□ 0.94
SMC4-209ENST00000468653 UBE4BO95155 1302 aa20.92■□□□□ 0.94
SMC4-209ENST00000468653 WDR81Q562E7 1941 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 MCM3APO60318 1980 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 TMEM88BA6NKF7 163 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 OATP04181 439 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 MAPTP10636 758 aaKnown RBP20.91■□□□□ 0.94
SMC4-209ENST00000468653 PBX1P40424 430 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms