RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PRR16Q569H4 304 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ARL6IP4Q66PJ3 421 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ATL3Q6DD88 541 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PIK3AP1Q6ZUJ8 805 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PLPPR4Q7Z2D5 763 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PLA2G4DQ86XP0 818 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 OR6J1Q8NGC5 347 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 NEK9Q8TD19 979 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 RASGRP4Q8TDF6 673 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 AFAP1L1Q8TED9 768 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 AFG1LQ8WV93 481 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SEPT1Q8WYJ6 367 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SPATA33Q96N06 139 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 GPR20Q99678 358 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ZNF577Q9BSK1 485 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 C16orf70Q9BSU1 422 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 MTG1Q9BT17 334 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ZSCAN16Q9H4T2 348 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 C11orf49Q9H6J7 331 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 MLXIPQ9HAP2 919 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 STARD7Q9NQZ5 370 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 EVA1BQ9NVM1 165 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 TMEM260Q9NX78 707 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 RTEL1Q9NZ71 1219 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 SLC9A2Q9UBY0 812 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 DDX25Q9UHL0 483 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 ZNF215Q9UL58 517 aaPredicted RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 NOL7Q9UMY1 257 aaKnown RBP3.98□□□□□ -1.77
TRIM59-202ENST00000468542 KCNJ14Q9UNX9 436 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 PPME1Q9Y570 386 aa3.98□□□□□ -1.77
TRIM59-202ENST00000468542 A0A1W2PQ45 241 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 A0A1W2PQY0 241 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MYADML2A6NDP7 307 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 H3BRB1 525 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ARVCFO00192 962 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ADAMTS3O15072 1205 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MSH4O15457 936 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 STX6O43752 255 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 CCNT1O60563 726 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 DKC1O60832 514 aaKnown RBP eCLIP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 GAS7O60861 476 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ATP9AO75110 1047 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 LYPLA2O95372 231 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 BAG4O95429 457 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 PARNO95453 639 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TDP2O95551 362 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 CCNE2O96020 404 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 LGALS2P05162 132 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 SUPT20HL2P0C7V6 817 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ARP10275 920 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 EN2P19622 333 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TCF7P36402 384 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 GMPRP36959 345 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 CDK7P50613 346 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ACTR2P61160 394 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MDM2Q00987 491 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 SP2Q02086 613 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 SPIRE1Q08AE8 756 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ITGB3BPQ13352 177 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 GNL2Q13823 731 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 PDIA5Q14554 519 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 LETM2Q2VYF4 491 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 EARS2Q5JPH6 523 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TTC38Q5R3I4 469 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 LRCH2Q5VUJ6 765 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 FAM160B1Q5W0V3 765 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MIS18BP1Q6P0N0 1132 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TAF2Q6P1X5 1199 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ABHD15Q6UXT9 468 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 SLC39A5Q6ZMH5 540 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 CYFIP1Q7L576 1253 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 RPAINQ86UA6 219 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 CYP2W1Q8TAV3 490 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 KAT2BQ92831 832 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 HAS1Q92839 578 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ATP6V0A1Q93050 837 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 LENG1Q96BZ8 264 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 PAWRQ96IZ0 340 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 FAM167AQ96KS9 214 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 AK8Q96MA6 479 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MTMR9Q96QG7 549 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TEKT3Q9BXF9 490 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 KLF16Q9BXK1 252 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 RAB34Q9BZG1 259 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 SMARCAD1Q9H4L7 1026 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TUT1Q9H6E5 874 aaKnown RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 AZI2Q9H6S1 392 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 GJB4Q9NTQ9 266 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ERAP1Q9NZ08 941 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 CEP131Q9UPN4 1083 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MTMR6Q9Y217 621 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 PCDHA10Q9Y5I2 948 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 ATP6V1DQ9Y5K8 247 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 MAFBQ9Y5Q3 323 aaPredicted RBP3.97□□□□□ -1.77
TRIM59-202ENST00000468542 TCHHQ07283 1943 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 PTPRSQ13332 1948 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 EVPLQ92817 2033 aa3.97□□□□□ -1.77
TRIM59-202ENST00000468542 NRCAMQ92823 1304 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms