RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KCTD2Q14681 263 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 ZNF720Q7Z2F6 126 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 CREBRFQ8IUR6 639 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 C12orf56Q8IXR9 622 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 ABRAQ8N0Z2 381 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 FAM133AQ8N9E0 248 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 PIGOQ8TEQ8 1089 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 EXOC7Q9UPT5 735 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
MSH5-213ENST00000468136 GTPBP10A4D1E9 387 aaKnown RBP11.22□□□□□ -0.61
MSH5-213ENST00000468136 ASB14A6NK59 587 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 MAPK13O15264 365 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 STRNO43815 780 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 DGAT1O75907 488 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 ATG7O95352 703 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 CCDC175P0C221 793 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 PLS3P13797 630 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 TNNT1P13805 278 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 NR2F2P24468 414 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 CASP14P31944 242 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 KRT9P35527 623 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 ANKRD23Q86SG2 305 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 TMEM139Q8IV31 216 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 TRIM59Q8IWR1 403 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 CCDC170Q8IYT3 715 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 KIF18AQ8NI77 898 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 VTI1AQ96AJ9 217 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 DNAJC7Q99615 494 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 OTOFQ9HC10 1997 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 ZCCHC17Q9NP64 241 aaKnown RBP11.22□□□□□ -0.61
MSH5-213ENST00000468136 ABHD10Q9NUJ1 306 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 BTBD7Q9P203 1132 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
MSH5-213ENST00000468136 FZD1Q9UP38 647 aa11.22□□□□□ -0.61
MSH5-213ENST00000468136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSH5-213ENST00000468136 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 DDX39AO00148 427 aaKnown RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 GAS2O43903 313 aaKnown RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 HIP1RO75146 1068 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 IPO7O95373 1038 aaKnown RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 NR3C1P04150 777 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 SUPT20HL2P0C7V6 817 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 ERCC3P19447 782 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 HNRNPH3P31942 346 aaKnown RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 PSMC2P35998 433 aaKnown RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 IRF5Q13568 498 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 MOGSQ13724 837 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 PPP2R5AQ15172 486 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 LRRC41Q15345 812 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 SYCP1Q15431 976 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 MEA1Q16626 185 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 FAM160B1Q5W0V3 765 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 E4F1Q66K89 784 aaPredicted RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 GPAT2Q6NUI2 795 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 ABHD15Q6UXT9 468 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 ZNF662Q6ZS27 426 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 SYN2Q92777 582 aaPredicted RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 HPS3Q969F9 1004 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 CLMNQ96JQ2 1002 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 FAM167AQ96KS9 214 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 ACCSQ96QU6 501 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 MMP19Q99542 508 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 STRA6Q9BX79 667 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 GBA2Q9HCG7 927 aaPredicted RBP11.21□□□□□ -0.61
MSH5-213ENST00000468136 MYO6Q9UM54 1294 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 FRMD4BQ9Y2L6 1034 aa11.21□□□□□ -0.61
MSH5-213ENST00000468136 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 ATP9AO75110 1047 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 CNMDO75829 334 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 PPP1R37O75864 691 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 RGS20O76081 388 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 CCNE2O96020 404 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 XRCC5P13010 732 aaKnown RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 ANXA13P27216 316 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 SLC26A2P50443 739 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 ADKP55263 362 aaKnown RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 ACTR2P61160 394 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 ERVK-24P63145 666 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 KRT83P78385 493 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 GTF2BQ00403 316 aa11.2□□□□□ -0.62
MSH5-213ENST00000468136 DMP1Q13316 513 aaPredicted RBP11.2□□□□□ -0.62
MSH5-213ENST00000468136 TUBB2AQ13885 445 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms