RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	FAM178B	Q8IXR5	827 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	EEF2KMT	Q96G04	330 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	CEP63	Q96MT8	703 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	PTPN18	Q99952	460 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	TUBGCP2	Q9BSJ2	902 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	TIPIN	Q9BVW5	301 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	SI	P14410	1827 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	SYNGAP1	Q96PV0	1343 aa		13.59	□□□□□ -0.23
HDLBP-231	ENST00000467435	ASB14	A6NK59	587 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	PES1	O00541	588 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	NRDC	O43847	1150 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	CALU	O43852	315 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	FARP2	O94887	1054 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	NMT1	P30419	496 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF157	P51786	506 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	FKBP3	Q00688	224 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	UBXN1	Q04323	297 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	NEDD9	Q14511	834 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	KNOP1	Q1ED39	458 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	FAM110C	Q1W6H9	321 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	EDRF1	Q3B7T1	1238 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	ODR4	Q5SWX8	454 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	KCNV1	Q6PIU1	500 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	MAEA	Q7L5Y9	396 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	OTUD6A	Q7L8S5	288 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	FBXO16	Q8IX29	292 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	DAW1	Q8N136	415 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	KIAA1524	Q8TCG1	905 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF507	Q8TCN5	953 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	MORC4	Q8TE76	937 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF302	Q9NR11	478 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	TYW1	Q9NV66	732 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	IVNS1ABP	Q9Y6Y0	642 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZMYM2	Q9UBW7	1377 aa		13.58	□□□□□ -0.24
HDLBP-231	ENST00000467435	MANSC4	A6NHS7	340 aa	Predicted RBP	13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435		K7ENM7	598 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF862	O60290	1169 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	STBD1	O95210	358 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	ATG7	O95352	703 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	GGPS1	O95749	300 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	TGFB3	P10600	412 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	SKIL	P12757	684 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	ADORA2A	P29274	412 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	CLCN1	P35523	988 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	NPEPPS	P55786	919 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	GOLGA8F	Q08AF8	430 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	GOLGA8DP	Q0D2H9	430 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	MAN2A1	Q16706	1144 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	CCDC40	Q4G0X9	1142 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	RGMB	Q6NW40	437 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	METTL7B	Q6UX53	244 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	ANO5	Q75V66	913 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	ABRA	Q8N0Z2	381 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	CEP170P1	Q96L14	293 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	DRC1	Q96MC2	740 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	FIZ1	Q96SL8	496 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	SH2D3A	Q9BRG2	576 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	NOC4L	Q9BVI4	516 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	TRAF3IP3	Q9Y228	551 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	ADGRA2	Q96PE1	1338 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	PASK	Q96RG2	1323 aa		13.57	□□□□□ -0.24
HDLBP-231	ENST00000467435	PDXK	O00764	312 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	ARIH2	O95376	493 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	GNA14	O95837	355 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	OAT	P04181	439 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	SLC10A3	P09131	477 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	TPM1	P09493	284 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	HOXD13	P35453	343 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	DNM2	P50570	870 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	TRIM14	Q14142	442 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	LY6K	Q17RY6	165 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZNF792	Q3KQV3	632 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	MIIP	Q5JXC2	388 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	ARMCX2	Q7L311	632 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	GPR142	Q7Z601	462 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	SAPCD2	Q86UD0	394 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	PPFIBP1	Q86W92	1011 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	CCDC112	Q8NEF3	446 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	ZCCHC17	Q9NP64	241 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	LARS	Q9P2J5	1176 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	DDX41	Q9UJV9	622 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	5e-9	■■■□□ 16.7
HDLBP-231	ENST00000467435	MGAM	O43451	1857 aa		13.56	□□□□□ -0.24
HDLBP-231	ENST00000467435	IGKV6D-21	A0A0A0MT36	114 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435		A0A1W2PQC6	194 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	GSTTP1	A0A1W2PQM5	241 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	2e-7	■■■□□ 16.1
HDLBP-231	ENST00000467435	CETN3	O15182	167 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	STRN	O43815	780 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	PPP1R37	O75864	691 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	MAPT	P10636	758 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	PLS3	P13797	630 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	NR2F2	P24468	414 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	MAPK4	P31152	587 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	ALCAM	Q13740	583 aa		13.55	□□□□□ -0.24
HDLBP-231	ENST00000467435	GRB14	Q14449	540 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms