RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 EP400NLQ6ZTU2 488 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 POLNQ7Z5Q5 900 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 NOP9Q86U38 636 aaKnown RBP6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 THAP3Q8WTV1 239 aaPredicted RBP6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 DPYSL5Q9BPU6 564 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 BTBD2Q9BX70 525 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 CCDC66A2RUB6 948 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 ARHGAP6O43182 974 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 CDC14BO60729 498 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 HMGCRP04035 888 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 ACO1P21399 889 aaKnown RBP6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 MC4RP32245 332 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 KLF10Q13118 480 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 TRIM68Q6AZZ1 485 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 MAMDC4Q6UXC1 1216 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 CFHR4Q92496 578 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 MRFAP1L1Q96HT8 127 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 AMNQ9BXJ7 453 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 MRPS23Q9Y3D9 190 aaKnown RBP6.7□□□□□ -1.34
PRPF40A-205ENST00000467114 PRAMEF25A6NGN4 478 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 PLSCR1O15162 318 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 CRTAMO95727 393 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 ECE1P42892 770 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 KCNQ1P51787 676 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 SEC23AQ15436 765 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 USP39Q53GS9 565 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 ZC3H12BQ5HYM0 836 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 ZC3H7AQ8IWR0 971 aaKnown RBP6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 MENTQ9BUN1 341 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 PLA2G12BQ9BX93 195 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 ZNF341Q9BYN7 854 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 SLITRK6Q9H5Y7 841 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 PTCH2Q9Y6C5 1203 aa6.69□□□□□ -1.34
PRPF40A-205ENST00000467114 NPIPB8E9PQR5 432 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 RPS19P39019 145 aaKnown RBP6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 ADCY8P40145 1251 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 DNM2P50570 870 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 NRN1LQ496H8 165 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 TMEM200BQ69YZ2 307 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 USP30Q70CQ3 517 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 NOSTRINQ8IVI9 506 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 EXTL1Q92935 676 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 PUF60Q9UHX1 559 aaKnown RBP6.68□□□□□ -1.34
PRPF40A-205ENST00000467114 A0A0G2JNJ9 132 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 KCNK3O14649 394 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 KCNQ2O43526 872 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 PCOLCEQ15113 449 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 GSTCDQ8NEC7 633 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 FAM89AQ96GI7 184 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 OR14A2Q96R54 314 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 OR10A5Q9H207 317 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 C12orf65Q9H3J6 166 aaKnown RBP6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 Q9UFV3 132 aa6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 ING1Q9UK53 422 aaPredicted RBP6.67□□□□□ -1.34
PRPF40A-205ENST00000467114 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 EFCAB14O75071 495 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 MMEP08473 750 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 CD83Q01151 205 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 TM4SF20Q53R12 229 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 TRIM61Q5EBN2 209 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 LRSAM1Q6UWE0 723 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 ZSWIM2Q8NEG5 633 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 OR10A2Q9H208 303 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 UCKL1Q9NWZ5 548 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 MRPL42Q9Y6G3 142 aaKnown RBP6.66□□□□□ -1.34
PRPF40A-205ENST00000467114 TLDC2A0PJX2 215 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 OVOL3O00110 214 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 MRE11P49959 708 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 PTH1RQ03431 593 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 OTOP2Q7RTS6 562 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 CISD2Q8N5K1 135 aaKnown RBP6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 ASB15Q8WXK1 588 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 DLG3Q92796 817 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 KCNH7Q9NS40 1196 aa6.65□□□□□ -1.34
PRPF40A-205ENST00000467114 CCDC163A0A0D9SF12 145 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 PMS2P1A4D2B8 440 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 SCDO00767 359 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 ENPP3O14638 875 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 MAFO75444 373 aaPredicted RBP6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 SDHAP31040 664 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 MEOX1P50221 254 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 HGFACQ04756 655 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 FOXL1Q12952 345 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 MOGSQ13724 837 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 FSTL4Q6MZW2 842 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 C1orf210Q8IVY1 113 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 WDR48Q8TAF3 677 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 NELFAQ9H3P2 528 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms