RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 PCDHA10Q9Y5I2 948 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
PMF1-204ENST00000466489 PHLPP2Q6ZVD8 1323 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 EMSYQ7Z589 1322 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 ARHGAP6O43182 974 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 CHMP2AO43633 222 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 F2P00734 622 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 OR52Z1P0C646 297 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 GNAT1P11488 350 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 RGS19P49795 217 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
PMF1-204ENST00000466489 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
PMF1-204ENST00000466489 ITGA7Q13683 1181 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 MFSD10Q14728 455 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 ZNF174Q15697 407 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 KIAA0753Q2KHM9 967 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 EARS2Q5JPH6 523 aaKnown RBP11.13□□□□□ -0.63
PMF1-204ENST00000466489 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 SLC39A5Q6ZMH5 540 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 MIER3Q7Z3K6 550 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 UBE2Q1Q7Z7E8 422 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 ETNPPLQ8TBG4 499 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 CACTINQ8WUQ7 758 aaKnown RBP11.13□□□□□ -0.63
PMF1-204ENST00000466489 ATP6V0A1Q93050 837 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 FAM167AQ96KS9 214 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 KCNMB3Q9NPA1 279 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 DISC1Q9NRI5 854 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 ATP11BQ9Y2G3 1177 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
PMF1-204ENST00000466489 V9GYY5 206 aaPredicted RBP11.13□□□□□ -0.63
PMF1-204ENST00000466489 BRCA2P51587 3418 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 PDE4DIPQ5VU43 2346 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 ARVCFO00192 962 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 STX10O60499 249 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 PQBP1O60828 265 aaKnown RBP11.12□□□□□ -0.63
PMF1-204ENST00000466489 PSMD10O75832 226 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 SERPINC1P01008 464 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 PSEN2P49810 448 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 STAT5BP51692 787 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 RTP1P59025 263 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 GPS2Q13227 327 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 SNX17Q15036 470 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 FILIP1LQ4L180 1135 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 TEX35Q5T0J7 233 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 PDXDC2PQ6P474 469 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 DHX40Q8IX18 779 aaKnown RBP11.12□□□□□ -0.63
PMF1-204ENST00000466489 ERMNQ8TAM6 284 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 ZNF302Q9NR11 478 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 PYCARDQ9ULZ3 195 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
PMF1-204ENST00000466489 LOXHD1Q8IVV2 1947 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 ALPK3Q96L96 1907 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
PMF1-204ENST00000466489 LGR5O75473 907 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 TXKP42681 527 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 UBASH3AP57075 661 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 PSMC6P62333 389 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 ETF1P62495 437 aaKnown RBP11.11□□□□□ -0.63
PMF1-204ENST00000466489 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
PMF1-204ENST00000466489 SPAG1Q07617 926 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 DMTNQ08495 405 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 NBPF20Q3BBV1 942 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 PLPPR4Q7Z2D5 763 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 KRT222Q8N1A0 295 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 CNNM3Q8NE01 707 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 C16orf45Q96MC5 204 aaPredicted RBP11.11□□□□□ -0.63
PMF1-204ENST00000466489 TOX2Q96NM4 488 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 C16orf70Q9BSU1 422 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 UNC45AQ9H3U1 944 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 KCNH3Q9ULD8 1083 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 HPSEQ9Y251 543 aa11.11□□□□□ -0.63
PMF1-204ENST00000466489 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 EDIL3O43854 480 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 ATG7O95352 703 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 CCNE2O96020 404 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 RPLP2P05387 115 aaKnown RBP11.1□□□□□ -0.63
PMF1-204ENST00000466489 MYL1P05976 194 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 MCM3P25205 808 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 MARK3P27448 753 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 PRPHP41219 470 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 PPP1R2P41236 205 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 NDUFA8P51970 172 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
PMF1-204ENST00000466489 PTGDRQ13258 359 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 LRRC26Q2I0M4 334 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 TRIM60Q495X7 471 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 NT5DC1Q5TFE4 455 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
PMF1-204ENST00000466489 ARL6IP4Q66PJ3 421 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms