RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 OTOP2Q7RTS6 562 aa8.24□□□□□ -1.09
SSB-207ENST00000465871 LILRB2Q8N423 598 aa8.24□□□□□ -1.09
SSB-207ENST00000465871 IGSF22Q8N9C0 903 aa8.24□□□□□ -1.09
SSB-207ENST00000465871 GBP4Q96PP9 640 aa8.24□□□□□ -1.09
SSB-207ENST00000465871 KIAA1683Q9H0B3 1180 aa8.24□□□□□ -1.09
SSB-207ENST00000465871 NR2E1Q9Y466 385 aa8.24□□□□□ -1.09
SSB-207ENST00000465871 RASSF10A6NK89 507 aa8.23□□□□□ -1.09
SSB-207ENST00000465871 CD83Q01151 205 aa8.23□□□□□ -1.09
SSB-207ENST00000465871 NFYCQ13952 458 aa8.23□□□□□ -1.09
SSB-207ENST00000465871 C2orf69Q8N8R5 385 aa8.23□□□□□ -1.09
SSB-207ENST00000465871 HIPK4Q8NE63 616 aa8.23□□□□□ -1.09
SSB-207ENST00000465871 SREK1Q8WXA9 508 aaKnown RBP8.23□□□□□ -1.09
SSB-207ENST00000465871 CDK11AQ9UQ88 783 aaPredicted RBP8.23□□□□□ -1.09
SSB-207ENST00000465871 TESMINQ9Y4I5 508 aa8.23□□□□□ -1.09
SSB-207ENST00000465871 A0A0G2JNJ9 132 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 PRAMEF22A3QJZ6 481 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 PLD2O14939 933 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 ARHGAP6O43182 974 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 CR2P20023 1033 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 IRF9Q00978 393 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 NFE2L2Q16236 605 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 SPDYAQ5MJ70 313 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 AGBL4Q5VU57 503 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 LARP4Q71RC2 724 aaKnown RBP eCLIP8.22□□□□□ -1.09
SSB-207ENST00000465871 FUKQ8N0W3 1084 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 DPYSL5Q9BPU6 564 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 Q9UFV3 132 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 CDC42EP3Q9UKI2 254 aa8.22□□□□□ -1.09
SSB-207ENST00000465871 CDC14BO60729 498 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 RAD17O75943 681 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 C6P13671 934 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 TACR2P21452 398 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 COMTP21964 271 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 MOGSQ13724 837 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 TMEM132BQ14DG7 1078 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 CATSPEREQ5SY80 951 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 TRIM68Q6AZZ1 485 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 GRAMD4Q6IC98 578 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 OTOP1Q7RTM1 612 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 CALML6Q8TD86 181 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 BOCQ9BWV1 1114 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 MSL2Q9HCI7 577 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 SLC30A1Q9Y6M5 507 aa8.21□□□□□ -1.1
SSB-207ENST00000465871 MATN2O00339 956 aa8.2□□□□□ -1.1
SSB-207ENST00000465871 AKAP8O43823 692 aaKnown RBP8.2□□□□□ -1.1
SSB-207ENST00000465871 MAFO75444 373 aaPredicted RBP8.2□□□□□ -1.1
SSB-207ENST00000465871 NOLC1Q14978 699 aaKnown RBP eCLIP8.2□□□□□ -1.1
SSB-207ENST00000465871 PCOLCEQ15113 449 aa8.2□□□□□ -1.1
SSB-207ENST00000465871 TBR1Q16650 682 aa8.2□□□□□ -1.1
SSB-207ENST00000465871 CRIP3Q6Q6R5 217 aa8.2□□□□□ -1.1
SSB-207ENST00000465871 USP30Q70CQ3 517 aa8.2□□□□□ -1.1
SSB-207ENST00000465871 B4E1Z4 1266 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 GOLGA6L22H0YM25 854 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 RAPGEF3O95398 923 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 ZBTB48P10074 688 aaPredicted RBP8.19□□□□□ -1.1
SSB-207ENST00000465871 MEOX1P50221 254 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 MECP2P51608 486 aaKnown RBP8.19□□□□□ -1.1
SSB-207ENST00000465871 DUSP8Q13202 625 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 BMS1Q14692 1282 aaKnown RBP8.19□□□□□ -1.1
SSB-207ENST00000465871 PRKD1Q15139 912 aaPredicted RBP8.19□□□□□ -1.1
SSB-207ENST00000465871 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 DDX53Q86TM3 631 aaKnown RBP8.19□□□□□ -1.1
SSB-207ENST00000465871 RTKN2Q8IZC4 609 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 CFHR4Q92496 578 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 EDAQ92838 391 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 ADOQ96SZ5 270 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 OR10A2Q9H208 303 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 VPS11Q9H270 941 aa8.19□□□□□ -1.1
SSB-207ENST00000465871 PUF60Q9UHX1 559 aaKnown RBP8.19□□□□□ -1.1
SSB-207ENST00000465871 IGFALSP35858 605 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 MRE11P49959 708 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 ARHGAP44Q17R89 818 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 FNDC3BQ53EP0 1204 aaKnown RBP8.18□□□□□ -1.1
SSB-207ENST00000465871 ZCCHC8Q6NZY4 707 aaKnown RBP8.18□□□□□ -1.1
SSB-207ENST00000465871 CC2D1AQ6P1N0 951 aaPredicted RBP8.18□□□□□ -1.1
SSB-207ENST00000465871 POLNQ7Z5Q5 900 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 OR14A2Q96R54 314 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 ZNF747Q9BV97 191 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 PLA2G12BQ9BX93 195 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 C12orf65Q9H3J6 166 aaKnown RBP8.18□□□□□ -1.1
SSB-207ENST00000465871 SRRDQ9UH36 339 aa8.18□□□□□ -1.1
SSB-207ENST00000465871 M0R2C6 588 aa8.17□□□□□ -1.1
SSB-207ENST00000465871 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
SSB-207ENST00000465871 FNTBP49356 437 aa8.17□□□□□ -1.1
SSB-207ENST00000465871 ALDH6A1Q02252 535 aaKnown RBP8.17□□□□□ -1.1
SSB-207ENST00000465871 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
SSB-207ENST00000465871 Q8N1X5 172 aa8.17□□□□□ -1.1
SSB-207ENST00000465871 SLC16A11Q8NCK7 471 aa8.17□□□□□ -1.1
SSB-207ENST00000465871 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
SSB-207ENST00000465871 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
SSB-207ENST00000465871 FOXB1Q99853 325 aa8.17□□□□□ -1.1
SSB-207ENST00000465871 GLRX3O76003 335 aaKnown RBP8.16□□□□□ -1.1
SSB-207ENST00000465871 FSHBP01225 129 aa8.16□□□□□ -1.1
SSB-207ENST00000465871 RPS19P39019 145 aaKnown RBP8.16□□□□□ -1.1
SSB-207ENST00000465871 STAT5BP51692 787 aa8.16□□□□□ -1.1
SSB-207ENST00000465871 MAP3K12Q12852 859 aa8.16□□□□□ -1.1
SSB-207ENST00000465871 SQSTM1Q13501 440 aa8.16□□□□□ -1.1
SSB-207ENST00000465871 CHST14Q8NCH0 376 aa8.16□□□□□ -1.1
SSB-207ENST00000465871 ERCC4Q92889 916 aaPredicted RBP8.16□□□□□ -1.1
SSB-207ENST00000465871 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms