RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 TYW1Q9NV66 732 aaKnown RBP11.79□□□□□ -0.52
GPNMB-206ENST00000465673 TMEM260Q9NX78 707 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 ST3GAL5Q9UNP4 418 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 MAFGO15525 162 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 PBX3P40426 434 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 PTPN5P54829 565 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 DUSP6Q16828 381 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 WWC2Q6AWC2 1192 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 TMTC3Q6ZXV5 915 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 TRMT1LQ7Z2T5 733 aaKnown RBP11.78□□□□□ -0.52
GPNMB-206ENST00000465673 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 COLGALT1Q8NBJ5 622 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 SUSD6Q92537 303 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 SDF4Q9BRK5 362 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 S1PR5Q9H228 398 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
GPNMB-206ENST00000465673 PCDHB12Q9Y5F1 795 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
GPNMB-206ENST00000465673 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
GPNMB-206ENST00000465673 DENND3A2RUS2 1198 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 HIDE1A8MVS5 230 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 ZBTB42B2RXF5 422 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 C9IYK1 514 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 FSCN2O14926 492 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 ADAMTS3O15072 1205 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 ATG7O95352 703 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 ATP4AP20648 1035 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 AVPR2P30518 371 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 MCM5P33992 734 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 TECP42680 631 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 SYCE2Q6PIF2 218 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 LRRC55Q6ZSA7 311 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 FAM228AQ86W67 206 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 MICU3Q86XE3 530 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 CCDC60Q8IWA6 550 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-206ENST00000465673 NME8Q8N427 588 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 FANCBQ8NB91 859 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 SNX27Q96L92 541 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
GPNMB-206ENST00000465673 OSMRQ99650 979 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 SMOC2Q9H3U7 446 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 CWH43Q9H720 699 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 USP34Q70CQ2 3546 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 NFASCO94856 1347 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 CACNA1HO95180 2353 aa11.77□□□□□ -0.53
GPNMB-206ENST00000465673 FNDC1Q4ZHG4 1894 aaPredicted RBP11.76□□□□□ -0.53
GPNMB-206ENST00000465673 KMT2EQ8IZD2 1858 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 IGKV6D-21A0A0A0MT36 114 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 H0Y858 1186 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 BACH1O14867 736 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 SLC27A2O14975 620 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 VTNP04004 478 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 RPLP2P05387 115 aaKnown RBP11.76□□□□□ -0.53
GPNMB-206ENST00000465673 UBE3AQ05086 875 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 KCNC3Q14003 757 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 CEP55Q53EZ4 464 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 SLC24A5Q71RS6 500 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
GPNMB-206ENST00000465673 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 ANO3Q9BYT9 981 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 RNF19AQ9NV58 838 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 SLC12A7Q9Y666 1083 aa11.76□□□□□ -0.53
GPNMB-206ENST00000465673 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 MEIS1O00470 390 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 HBP1O60381 514 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 GFRA3O60609 400 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
GPNMB-206ENST00000465673 LIFRP42702 1097 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 NAPAP54920 295 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 FAM189BP81408 668 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 DSC3Q14574 896 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 SWSAP1Q6NVH7 229 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 KANK3Q6NY19 840 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 PDXDC2PQ6P474 469 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
GPNMB-206ENST00000465673 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 TCF25Q9BQ70 676 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 LSG1Q9H089 658 aaKnown RBP11.75□□□□□ -0.53
GPNMB-206ENST00000465673 ATP6V0A4Q9HBG4 840 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 RIC8AQ9NPQ8 531 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
GPNMB-206ENST00000465673 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
GPNMB-206ENST00000465673 EVPLQ92817 2033 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 SMCO2A6NFE2 343 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms