RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 RALGAPA2Q2PPJ7 1873 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 GRXCR2A6NFK2 248 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 H3BQ06 376 aaPredicted RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 REC8O95072 547 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 STAG3L1P0CL83 205 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 SETQ01105 290 aaPredicted RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 PTCRAQ6ISU1 281 aaPredicted RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 EP400NLQ6ZTU2 488 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 TRMT1LQ7Z2T5 733 aaKnown RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 FAM178BQ8IXR5 827 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 CKAP2LQ8IYA6 745 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 BICD2Q8TD16 824 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 NCOA5Q9HCD5 579 aaKnown RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 VPS54Q9P1Q0 977 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 NOC2LQ9Y3T9 749 aaKnown RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 PCDHA10Q9Y5I2 948 aa23.66■■□□□ 1.38
CSPG5-204ENST00000465441 MRPL42Q9Y6G3 142 aaKnown RBP23.66■■□□□ 1.38
CSPG5-204ENST00000465441 CMTR2Q8IYT2 770 aaKnown RBP23.65■■□□□ 1.38
CSPG5-204ENST00000465441 BBXQ8WY36 941 aaPredicted RBP23.65■■□□□ 1.38
CSPG5-204ENST00000465441 PLVAPQ9BX97 442 aa23.65■■□□□ 1.38
CSPG5-204ENST00000465441 ERVK-5Q9HDB9 667 aa23.65■■□□□ 1.38
CSPG5-204ENST00000465441 ALG13Q9NP73 1137 aaKnown RBP23.65■■□□□ 1.38
CSPG5-204ENST00000465441 GABBR1Q9UBS5 961 aa23.65■■□□□ 1.38
CSPG5-204ENST00000465441 MYO7AQ13402 2215 aa23.64■■□□□ 1.38
CSPG5-204ENST00000465441 RPS6KA5O75582 802 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 PSAPP07602 524 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 COL19A1Q14993 1142 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 PUS10Q3MIT2 529 aaKnown RBP23.64■■□□□ 1.37
CSPG5-204ENST00000465441 PAN2Q504Q3 1202 aaKnown RBP23.64■■□□□ 1.37
CSPG5-204ENST00000465441 RUFY3Q7L099 469 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 SMAP1Q8IYB5 467 aaPredicted RBP23.64■■□□□ 1.37
CSPG5-204ENST00000465441 CCDC148Q8NFR7 591 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 TMEM40Q8WWA1 233 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 LENG9Q96B70 501 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 ZSWIM6Q9HCJ5 1215 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 CLDND1Q9NY35 253 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 PLAGL2Q9UPG8 496 aa23.64■■□□□ 1.37
CSPG5-204ENST00000465441 MGEA5O60502 916 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 C22orf31O95567 290 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 GATMP50440 423 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 CAMK1Q14012 370 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 TOB2Q14106 344 aaPredicted RBP23.63■■□□□ 1.37
CSPG5-204ENST00000465441 EVPLQ92817 2033 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 LRFN2Q9ULH4 789 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 ST3GAL5Q9UNP4 418 aa23.63■■□□□ 1.37
CSPG5-204ENST00000465441 IBSPP21815 317 aaPredicted RBP23.62■■□□□ 1.37
CSPG5-204ENST00000465441 LTBRP36941 435 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 SARSP49591 514 aaKnown RBP23.62■■□□□ 1.37
CSPG5-204ENST00000465441 USP11P51784 963 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 NLRP5P59047 1200 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 HYAL1Q12794 435 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 GJD3Q8N144 294 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 METTL13Q8N6R0 699 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 P2RX5Q93086 422 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 PPP1R16BQ96T49 567 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 SH3GLB2Q9NR46 395 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 TCEAL9Q9UHQ7 104 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 SAMM50Q9Y512 469 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 PCDHB7Q9Y5E2 793 aa23.62■■□□□ 1.37
CSPG5-204ENST00000465441 GPR182O15218 404 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 MSH4O15457 936 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 EPB41L2O43491 1005 aaKnown RBP23.61■■□□□ 1.37
CSPG5-204ENST00000465441 NCK2O43639 380 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 GPR32O75388 356 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 CSPG5O95196 566 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 CRYBB1P53674 252 aaPredicted RBP23.61■■□□□ 1.37
CSPG5-204ENST00000465441 KIZQ2M2Z5 673 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 CTC1Q2NKJ3 1217 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 NAALADL2Q58DX5 795 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 ODR4Q5SWX8 454 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 FAM43BQ6ZT52 329 aaPredicted RBP23.61■■□□□ 1.37
CSPG5-204ENST00000465441 SPPL3Q8TCT6 385 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 OSMRQ99650 979 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 ADAM2Q99965 735 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
CSPG5-204ENST00000465441 LRFN3Q9BTN0 628 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 RGS18Q9NS28 235 aa23.61■■□□□ 1.37
CSPG5-204ENST00000465441 PI4K2BG5E9Z4 385 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 MMP1P03956 469 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 VTNP04004 478 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 ITGB1P05556 798 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 DNAJB1P25685 340 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 SSRP1Q08945 709 aaKnown RBP23.6■■□□□ 1.37
CSPG5-204ENST00000465441 KLHL23Q8NBE8 558 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 IGFLR1Q9H665 355 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 DISC1Q9NRI5 854 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 CEP131Q9UPN4 1083 aa23.6■■□□□ 1.37
CSPG5-204ENST00000465441 MYH9P35579 1960 aaKnown RBP23.6■■□□□ 1.37
CSPG5-204ENST00000465441 DENND3A2RUS2 1198 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 WDR64B1ANS9 1081 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 MAGEB2O15479 319 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 GTF2F1P35269 517 aaKnown RBP eCLIP23.59■■□□□ 1.37
CSPG5-204ENST00000465441 DLX2Q07687 328 aaPredicted RBP23.59■■□□□ 1.37
CSPG5-204ENST00000465441 FAM102BQ5T8I3 360 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 EFCAB12Q6NXP0 572 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 SLC24A5Q71RS6 500 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 FAM228AQ86W67 206 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 ZNF274Q96GC6 653 aaPredicted RBP23.59■■□□□ 1.37
CSPG5-204ENST00000465441 C1orf112Q9NSG2 853 aa23.59■■□□□ 1.37
CSPG5-204ENST00000465441 NRBP2Q9NSY0 501 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms