RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 MSLNLQ96KJ4 702 aa25.75■■□□□ 1.71
USP4-208ENST00000464168 ERVK-5Q9HDB9 667 aa25.75■■□□□ 1.71
USP4-208ENST00000464168 LRFN2Q9ULH4 789 aa25.75■■□□□ 1.71
USP4-208ENST00000464168 GINS2Q9Y248 185 aa25.75■■□□□ 1.71
USP4-208ENST00000464168 NOC2LQ9Y3T9 749 aaKnown RBP25.75■■□□□ 1.71
USP4-208ENST00000464168 GOLGA8AA7E2F4 631 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 GOLGA8BA8MQT2 603 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 ZBTB42B2RXF5 422 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 SARSP49591 514 aaKnown RBP25.74■■□□□ 1.71
USP4-208ENST00000464168 BMP2KLQ5H9B9 411 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 FAM160B1Q5W0V3 765 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 PLA2G4DQ86XP0 818 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 EFHBQ8N7U6 833 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 TMEM40Q8WWA1 233 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 CRYGNQ8WXF5 182 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 PPP2R3CQ969Q6 453 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 POP1Q99575 1024 aaKnown RBP25.74■■□□□ 1.71
USP4-208ENST00000464168 CLEC1BQ9P126 229 aa25.74■■□□□ 1.71
USP4-208ENST00000464168 IGLV3-22A0A075B6J6 115 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 KLF18A0A0U1RQI7 1052 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 EYA4O95677 639 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 ATP4AP20648 1035 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 IBSPP21815 317 aaPredicted RBP25.73■■□□□ 1.71
USP4-208ENST00000464168 NDUFV1P49821 464 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 ZNF484Q5JVG2 852 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 JAKMIP3Q5VZ66 844 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 SWSAP1Q6NVH7 229 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 PDXDC2PQ6P474 469 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 FAM43BQ6ZT52 329 aaPredicted RBP25.73■■□□□ 1.71
USP4-208ENST00000464168 SKAP1Q86WV1 359 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 ZNF302Q9NR11 478 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 PCDHB7Q9Y5E2 793 aa25.73■■□□□ 1.71
USP4-208ENST00000464168 COL1A2P08123 1366 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 RPS6KA5O75582 802 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 CYP3A4P08684 503 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 RNF135Q8IUD6 432 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 ADAM2Q99965 735 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 RGS18Q9NS28 235 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 MUTYHQ9UIF7 546 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 ST3GAL5Q9UNP4 418 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 LOXHD1Q8IVV2 1947 aa25.72■■□□□ 1.71
USP4-208ENST00000464168 IPO5O00410 1097 aaKnown RBP25.71■■□□□ 1.71
USP4-208ENST00000464168 ADAMTS3O15072 1205 aa25.71■■□□□ 1.71
USP4-208ENST00000464168 PPFIA3O75145 1194 aa25.71■■□□□ 1.71
USP4-208ENST00000464168 ADD1P35611 737 aaKnown RBP25.71■■□□□ 1.71
USP4-208ENST00000464168 NRIP1P48552 1158 aa25.71■■□□□ 1.71
USP4-208ENST00000464168 RCAN1P53805 252 aa25.71■■□□□ 1.71
USP4-208ENST00000464168 PFKFB3Q16875 520 aaPredicted RBP25.71■■□□□ 1.71
USP4-208ENST00000464168 HERC4Q5GLZ8 1057 aaPredicted RBP25.71■■□□□ 1.71
USP4-208ENST00000464168 MIS18BP1Q6P0N0 1132 aa25.71■■□□□ 1.71
USP4-208ENST00000464168 PCDHGC5Q9Y5F6 944 aa25.71■■□□□ 1.71
USP4-208ENST00000464168 DENND3A2RUS2 1198 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 C9IYK1 514 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 FAM102BQ5T8I3 360 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 HFE2Q6ZVN8 426 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 SLC24A5Q71RS6 500 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 RBM23Q86U06 439 aaKnown RBP25.7■■□□□ 1.7
USP4-208ENST00000464168 SMRP1Q8NCR6 262 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 C1orf112Q9NSG2 853 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 KIAA1671Q9BY89 1806 aa25.7■■□□□ 1.7
USP4-208ENST00000464168 TBKBP1A7MCY6 615 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 GPR182O15218 404 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 C22orf31O95567 290 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 GLP2RO95838 553 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 COASYQ13057 564 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 KIZQ2M2Z5 673 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 PCDHB12Q9Y5F1 795 aa25.69■■□□□ 1.7
USP4-208ENST00000464168 MAFBQ9Y5Q3 323 aaPredicted RBP25.69■■□□□ 1.7
USP4-208ENST00000464168 CRYBB1P53674 252 aaPredicted RBP25.68■■□□□ 1.7
USP4-208ENST00000464168 FAM189BP81408 668 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 KRT32Q14532 448 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 ODR4Q5SWX8 454 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 BBXQ8WY36 941 aaPredicted RBP25.68■■□□□ 1.7
USP4-208ENST00000464168 PPP1R16BQ96T49 567 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 ZNF577Q9BSK1 485 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 ZMYND12Q9H0C1 365 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 TBC1D22BQ9NU19 505 aa25.68■■□□□ 1.7
USP4-208ENST00000464168 RNF216Q9NWF9 866 aaPredicted RBP25.68■■□□□ 1.7
USP4-208ENST00000464168 NAP1L2Q9ULW6 460 aaPredicted RBP25.68■■□□□ 1.7
USP4-208ENST00000464168 ESYT2A0FGR8 921 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 GPR32O75388 356 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 UBE3AQ05086 875 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 SPOUT1Q5T280 376 aaKnown RBP25.67■■□□□ 1.7
USP4-208ENST00000464168 ZNF746Q6NUN9 644 aaPredicted RBP25.67■■□□□ 1.7
USP4-208ENST00000464168 FAM228AQ86W67 206 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 CKAP2LQ8IYA6 745 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 OSMRQ99650 979 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 TLE6Q9H808 572 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 AAASQ9NRG9 546 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 TYW1Q9NV66 732 aaKnown RBP25.67■■□□□ 1.7
USP4-208ENST00000464168 HCSTQ9UBK5 93 aa25.67■■□□□ 1.7
USP4-208ENST00000464168 BARX2Q9UMQ3 279 aaPredicted RBP25.67■■□□□ 1.7
USP4-208ENST00000464168 TECTAO75443 2155 aa25.66■■□□□ 1.7
USP4-208ENST00000464168 ZNF318Q5VUA4 2279 aa25.66■■□□□ 1.7
USP4-208ENST00000464168 VTNP04004 478 aa25.66■■□□□ 1.7
USP4-208ENST00000464168 HMGB1P09429 215 aaKnown RBP25.66■■□□□ 1.7
USP4-208ENST00000464168 METAP2P50579 478 aaKnown RBP eCLIP25.66■■□□□ 1.7
USP4-208ENST00000464168 TRMT1LQ7Z2T5 733 aaKnown RBP25.66■■□□□ 1.7
USP4-208ENST00000464168 ALYREFQ86V81 257 aaKnown RBP25.66■■□□□ 1.7
USP4-208ENST00000464168 MICAL1Q8TDZ2 1067 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms