RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 MSLNLQ96KJ4 702 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 AIFM3Q96NN9 605 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 SAMD11Q96NU1 681 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 ZMYND12Q9H0C1 365 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 ADAMTS10Q9H324 1103 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 NSUN3Q9H649 340 aaKnown RBP6.47□□□□□ -1.37
CCR9-205ENST00000463197 IGFLR1Q9H665 355 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 CWH43Q9H720 699 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 NCOA5Q9HCD5 579 aaKnown RBP6.47□□□□□ -1.37
CCR9-205ENST00000463197 RBM28Q9NW13 759 aaKnown RBP6.47□□□□□ -1.37
CCR9-205ENST00000463197 CLDND1Q9NY35 253 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 ST3GAL5Q9UNP4 418 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 TRPC6Q9Y210 931 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 TRPV2Q9Y5S1 764 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 SQORQ9Y6N5 450 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 ADGRA3Q8IWK6 1321 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 KDM3AQ9Y4C1 1321 aa6.47□□□□□ -1.37
CCR9-205ENST00000463197 C9IYK1 514 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 IPO5O00410 1097 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 PER2O15055 1255 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 MSH4O15457 936 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 HBP1O60381 514 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 CSDE1O75534 798 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 FOSP01100 380 aaPredicted RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 MMP1P03956 469 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 VTNP04004 478 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 FGFR1P11362 822 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 SCG2P13521 617 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 FGFR4P22455 802 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 RPS6KB1P23443 525 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 CIITAP33076 1130 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 PLA2G5P39877 138 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 CCT2P78371 535 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 KRT76Q01546 638 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 KCNC3Q14003 757 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 SMAD2Q15796 467 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 KIZQ2M2Z5 673 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 IER5Q5VY09 327 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 PPP1R18Q6NYC8 613 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 B3GNT9Q6UX72 402 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 CENPQQ7L2Z9 268 aaPredicted RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 NIPA1Q7RTP0 329 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 NME8Q8N427 588 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 LRRC71Q8N4P6 559 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 ZNF579Q8NAF0 562 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 IL27Q8NEV9 243 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 ATP8B4Q8TF62 1192 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 POF1BQ8WVV4 589 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 JAKMIP1Q96N16 626 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 CASD1Q96PB1 797 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 OSMRQ99650 979 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 ADAM2Q99965 735 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 SH2D3AQ9BRG2 576 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 SDF4Q9BRK5 362 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 C1QTNF1Q9BXJ1 281 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 ZNF302Q9NR11 478 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 RGS18Q9NS28 235 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 GJB4Q9NTQ9 266 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 TYW1Q9NV66 732 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 PPP4R2Q9NY27 417 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 VPS54Q9P1Q0 977 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 CDH22Q9UJ99 828 aa6.46□□□□□ -1.38
CCR9-205ENST00000463197 RBM19Q9Y4C8 960 aaKnown RBP6.46□□□□□ -1.38
CCR9-205ENST00000463197 NID2Q14112 1375 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 ESYT2A0FGR8 921 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 CDC45O75419 566 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 EYA4O95677 639 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 ATF7P17544 494 aaPredicted RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 IBSPP21815 317 aaPredicted RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 PBX3P40426 434 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 SARSP49591 514 aaKnown RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 METAP2P50579 478 aaKnown RBP eCLIP6.45□□□□□ -1.38
CCR9-205ENST00000463197 CLCN3P51790 818 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 PAK2Q13177 524 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 AP3B2Q13367 1082 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 TARBP2Q15633 366 aaKnown RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 PTPROQ16827 1216 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 PRR16Q569H4 304 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 EARS2Q5JPH6 523 aaKnown RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 ZNF484Q5JVG2 852 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 TMEM31Q5JXX7 168 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 RNF20Q5VTR2 975 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 PDXDC2PQ6P474 469 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 SYNE3Q6ZMZ3 975 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 EP400NLQ6ZTU2 488 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 RBM23Q86U06 439 aaKnown RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 NPAS4Q8IUM7 802 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 CMTR2Q8IYT2 770 aaKnown RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 P2RX5Q93086 422 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 ZNF577Q9BSK1 485 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 PLVAPQ9BX97 442 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 UNC45AQ9H3U1 944 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 AZI2Q9H6S1 392 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 ZSWIM6Q9HCJ5 1215 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 WRAP73Q9P2S5 460 aaPredicted RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 GABBR1Q9UBS5 961 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 BARX2Q9UMQ3 279 aaPredicted RBP6.45□□□□□ -1.38
CCR9-205ENST00000463197 GINS2Q9Y248 185 aa6.45□□□□□ -1.38
CCR9-205ENST00000463197 MICAL3Q7RTP6 2002 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms