RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 LZTR1Q8N653 840 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 PPM1NQ8N819 430 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 COA7Q96BR5 231 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 JMJD8Q96S16 334 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 SSBP4Q9BWG4 385 aaPredicted RBP7.16□□□□□ -1.26
COPS3-205ENST00000463097 CASS4Q9NQ75 786 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 TERF2IPQ9NYB0 399 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 PPP2R3BQ9Y5P8 575 aa7.16□□□□□ -1.26
COPS3-205ENST00000463097 TTBK1Q5TCY1 1321 aaPredicted RBP7.16□□□□□ -1.26
COPS3-205ENST00000463097 A0A1W2PQ45 241 aaPredicted RBP7.15□□□□□ -1.26
COPS3-205ENST00000463097 A0A1W2PQY0 241 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 PRSS38A1L453 326 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 FAM90A27PA6NNH2 459 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 SLC27A2O14975 620 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 FOXP2O15409 715 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 WFS1O76024 890 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 ECE1P42892 770 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 ALDH6A1Q02252 535 aaKnown RBP7.15□□□□□ -1.26
COPS3-205ENST00000463097 SEMA5AQ13591 1074 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 HSF5Q4G112 596 aaPredicted RBP7.15□□□□□ -1.26
COPS3-205ENST00000463097 PITRM1Q5JRX3 1037 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 BTBD8Q5XKL5 378 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 STEAP3Q658P3 488 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 RBM12BQ8IXT5 1001 aaKnown RBP7.15□□□□□ -1.26
COPS3-205ENST00000463097 SMAP1Q8IYB5 467 aaPredicted RBP7.15□□□□□ -1.26
COPS3-205ENST00000463097 C7orf31Q8N865 590 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 AUTS2Q8WXX7 1259 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 WNT8AQ9H1J5 351 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 SMOC1Q9H4F8 434 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 ATP13A1Q9HD20 1204 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 RIC8BQ9NVN3 520 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 TELO2Q9Y4R8 837 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 PCDHGB6Q9Y5F9 930 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 SNX11Q9Y5W9 270 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 PITPNM2Q9BZ72 1349 aa7.15□□□□□ -1.26
COPS3-205ENST00000463097 ELL2O00472 640 aaPredicted RBP7.14□□□□□ -1.27
COPS3-205ENST00000463097 B3GALT2O43825 422 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 UBXN7O94888 489 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 LPLP06858 475 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 TM4SF4P48230 202 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 CORO7P57737 925 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 CHRNA2Q15822 529 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 MUM1Q2TAK8 710 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 PGS1Q32NB8 556 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 EMC4Q5J8M3 183 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 RNF43Q68DV7 783 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 DARS2Q6PI48 645 aaKnown RBP7.14□□□□□ -1.27
COPS3-205ENST00000463097 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.14□□□□□ -1.27
COPS3-205ENST00000463097 SLCO6A1Q86UG4 719 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 KIAA0319LQ8IZA0 1049 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.14□□□□□ -1.27
COPS3-205ENST00000463097 HHIPL1Q96JK4 782 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 CCDC138Q96M89 665 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 METTL22Q9BUU2 404 aaPredicted RBP7.14□□□□□ -1.27
COPS3-205ENST00000463097 POFUT1Q9H488 388 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 FNIP2Q9P278 1114 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 L1RE1Q9UN81 338 aa7.14□□□□□ -1.27
COPS3-205ENST00000463097 PRAMEF25A6NGN4 478 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 HGSO14964 777 aaPredicted RBP7.13□□□□□ -1.27
COPS3-205ENST00000463097 PIP5K1CO60331 668 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 NBNO60934 754 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 DTNBO60941 627 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 TADA3O75528 432 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 CD53P19397 219 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 PPM1FP49593 454 aaPredicted RBP7.13□□□□□ -1.27
COPS3-205ENST00000463097 SLC16A1P53985 500 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 DUSP4Q13115 394 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 TUSC3Q13454 348 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 ZBTB41Q5SVQ8 909 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
COPS3-205ENST00000463097 MBNL2Q5VZF2 373 aaKnown RBP7.13□□□□□ -1.27
COPS3-205ENST00000463097 TIGD7Q6NT04 549 aaPredicted RBP7.13□□□□□ -1.27
COPS3-205ENST00000463097 CPXCR1Q8N123 301 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 SYTL4Q96C24 671 aaPredicted RBP7.13□□□□□ -1.27
COPS3-205ENST00000463097 PGBD4Q96DM1 585 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 MAML3Q96JK9 1138 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 G6PC3Q9BUM1 346 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 BHMT2Q9H2M3 363 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 LUZP4Q9P127 313 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 FBLN5Q9UBX5 448 aa7.13□□□□□ -1.27
COPS3-205ENST00000463097 TMEM265A0A087WTH1 108 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 F5H423 210 aaPredicted RBP7.12□□□□□ -1.27
COPS3-205ENST00000463097 RNF225M0QZC1 329 aaPredicted RBP7.12□□□□□ -1.27
COPS3-205ENST00000463097 GOLIM4O00461 696 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 NTRK1P04629 796 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 TYRP1P17643 537 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 RNF220Q5VTB9 566 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 SPTY2D1Q68D10 685 aaPredicted RBP7.12□□□□□ -1.27
COPS3-205ENST00000463097 PLD6Q8N2A8 252 aaKnown RBP7.12□□□□□ -1.27
COPS3-205ENST00000463097 PAF1Q8N7H5 531 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 PHOSPHO1Q8TCT1 267 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 NETO1Q8TDF5 533 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 ERCC4Q92889 916 aaPredicted RBP7.12□□□□□ -1.27
COPS3-205ENST00000463097 ASIC4Q96FT7 647 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 SGCZQ96LD1 299 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 TUBGCP5Q96RT8 1024 aa7.12□□□□□ -1.27
COPS3-205ENST00000463097 TBCBQ99426 244 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms