RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 KSR1Q8IVT5 923 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 LILRB2Q8N423 598 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 OXR1Q8N573 874 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 ANKS4BQ8N8V4 417 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 MYLIPQ8WY64 445 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 KAZALD1Q96I82 304 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 AARSD1Q9BTE6 412 aaKnown RBP8.96□□□□□ -0.98
UBE4B-204ENST00000462658 IER2Q9BTL4 223 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.98
UBE4B-204ENST00000462658 TNFRSF10DQ9UBN6 386 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 CICQ96RK0 1608 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-204ENST00000462658 PSPNO60542 156 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 RPS6KA4O75676 772 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 PLS3P13797 630 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 KIR2DL1P43626 348 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-204ENST00000462658 KIR2DL2P43627 348 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-204ENST00000462658 GFRA1P56159 465 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 RTP1P59025 263 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 SLC14A2Q15849 920 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 FOXB2Q5VYV0 432 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 ATG4DQ86TL0 474 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-204ENST00000462658 CPNE8Q86YQ8 564 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 SPPL2CQ8IUH8 684 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 TMEM145Q8NBT3 493 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 FRS2Q8WU20 508 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 JMJD8Q96S16 334 aa8.95□□□□□ -0.98
UBE4B-204ENST00000462658 CWC22Q9HCG8 908 aaKnown RBP8.95□□□□□ -0.98
UBE4B-204ENST00000462658 ZNF831Q5JPB2 1677 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 ARFGEF2Q9Y6D5 1785 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 FITM1A5D6W6 292 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 PRODHO43272 600 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 SURF6O75683 361 aaKnown RBP8.94□□□□□ -0.98
UBE4B-204ENST00000462658 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 PCCAP05165 728 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-204ENST00000462658 RAC2P15153 192 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 GPTP24298 496 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 AFMP43652 599 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 CHRNEQ04844 493 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 LAPTM5Q13571 262 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 HSF5Q4G112 596 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-204ENST00000462658 EPHA10Q5JZY3 1008 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 SLCO6A1Q86UG4 719 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 NLRP10Q86W26 655 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 AMIGO3Q86WK7 504 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 ZNF34Q8IZ26 560 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 KREMEN2Q8NCW0 462 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 PLCD4Q9BRC7 762 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 TMEFF2Q9UIK5 374 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-204ENST00000462658 GPR160Q9UJ42 338 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 EXOC6BQ9Y2D4 811 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 COL15A1P39059 1388 aa8.94□□□□□ -0.98
UBE4B-204ENST00000462658 UTRNP46939 3433 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 TRAV20A0A0B4J274 112 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 ARNTLO00327 626 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 SMARCA5O60264 1052 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-204ENST00000462658 DLX3O60479 287 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 RAB11FIP3O75154 756 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 PAPLNO95428 1278 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 TBC1D8O95759 1140 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 HMGB2P26583 209 aaKnown RBP8.93□□□□□ -0.98
UBE4B-204ENST00000462658 FOXO4P98177 505 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 HSP90AB4PQ58FF6 505 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 HLA-DQA1Q5Y7H0 255 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 DENND5AQ6IQ26 1287 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 CLEC4GQ6UXB4 293 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 CYP2R1Q6VVX0 501 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 ZBTB38Q8NAP3 1195 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-204ENST00000462658 NPLOC4Q8TAT6 608 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 ABHD4Q8TB40 342 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 KIRREL1Q96J84 757 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 LRRCC1Q9C099 1032 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 ZNF652Q9Y2D9 606 aa8.93□□□□□ -0.98
UBE4B-204ENST00000462658 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 UBR3Q6ZT12 1888 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 NPHP3-ACAD11A0A0J9YXS1 232 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 SCG5P05408 212 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 PABPC1P11940 636 aaKnown RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 TAL1P17542 331 aaPredicted RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 PAMP19021 973 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 NR0B2Q15466 257 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 RABL6Q3YEC7 729 aaPredicted RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 PARP10Q53GL7 1025 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 LMBR1LQ6UX01 489 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 SMIM5Q71RC9 77 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 JAMLQ86YT9 394 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 C16orf71Q8IYS4 520 aaPredicted RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 OSBP2Q969R2 916 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 FAM89AQ96GI7 184 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 C1orf159Q96HA4 380 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 RNF32Q9H0A6 362 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 KANSL2Q9H9L4 492 aa8.92□□□□□ -0.98
UBE4B-204ENST00000462658 TRMT112Q9UI30 125 aaKnown RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 NOP58Q9Y2X3 529 aaKnown RBP8.92□□□□□ -0.98
UBE4B-204ENST00000462658 COL5A3P25940 1745 aaPredicted RBP8.91□□□□□ -0.98
UBE4B-204ENST00000462658 UBN2Q6ZU65 1347 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 NRDCO43847 1150 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 CPP00450 1065 aa8.91□□□□□ -0.98
UBE4B-204ENST00000462658 FGFR1P11362 822 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms