RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 JAM2P57087 298 aa12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 EPB41L4BQ9H329 900 aa12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 ARMCX3Q9UH62 379 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 PNMA2Q9UL42 364 aa12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 INTUQ9ULD6 942 aa12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
CDK5RAP1-207ENST00000461710 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 POTECB2RU33 542 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 CTNND1O60716 968 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TRIM37O94972 964 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 EPHA7Q15375 998 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ARSHQ5FYA8 562 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 NLRP3Q96P20 1036 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 VEZTQ9HBM0 779 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TRAF3IP3Q9Y228 551 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 CCT8L1PA6NM43 557 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 FGGP02679 453 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 EZRP15311 586 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SLC8A1P32418 973 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ELF3P78545 371 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 HOOK3Q86VS8 718 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 CCDC197Q8NCU1 140 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TRIM31Q9BZY9 425 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ZDHHC18Q9NUE0 388 aa12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 MARCH6O60337 910 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SHBGP04278 402 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 NUDT17P0C025 328 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 CHN1P15882 459 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PTENP60484 403 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 E2F5Q15329 346 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DCAF12L1Q5VU92 463 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 VPS36Q86VN1 386 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 MIEF2Q96C03 454 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PPP1R11O60927 126 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 LDHCP07864 332 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 XRCC5P13010 732 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 HOXD13P35453 343 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 BTDP43251 543 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PPP1R18Q6NYC8 613 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TLDC1Q6P9B6 456 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ADAM7Q9H2U9 754 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ATP6V0A4Q9HBG4 840 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 AMFRQ9UKV5 643 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SLC12A4Q9UP95 1085 aa12.51□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DDX3YO15523 660 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 MMEP08473 750 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SCP2P22307 547 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 MMP13P45452 471 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 GALCP54803 685 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 MSL1Q68DK7 614 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PIGWQ7Z7B1 504 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 U2AF1L4Q8WU68 220 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PGM2Q96G03 612 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ZHX3Q9H4I2 956 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TNRC6CQ9HCJ0 1690 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ASAP2O43150 1006 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 AKAP3O75969 853 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ATP6V1G2O95670 118 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SNHG28P0DPA3 235 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 KLRC3Q07444 240 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ANKS4BQ8N8V4 417 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 SLC30A5Q8TAD4 765 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PPP1R9AQ9ULJ8 1098 aa12.5□□□□□ -0.41
CDK5RAP1-207ENST00000461710 NCANO14594 1321 aa12.49□□□□□ -0.41
CDK5RAP1-207ENST00000461710 PNMA6FA0A0J9YX94 578 aa12.49□□□□□ -0.41
CDK5RAP1-207ENST00000461710 GSTA1P08263 222 aa12.49□□□□□ -0.41
CDK5RAP1-207ENST00000461710 TM4SF1P30408 202 aa12.49□□□□□ -0.41
CDK5RAP1-207ENST00000461710 DR1Q01658 176 aa12.49□□□□□ -0.41
CDK5RAP1-207ENST00000461710 ITIH4Q14624 930 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms