RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SYMPKQ92797 1274 aaKnown RBP17.55■□□□□ 0.4
NUP50-213ENST00000461437 PADI3Q9ULW8 664 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 PCDHA10Q9Y5I2 948 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 MAFBQ9Y5Q3 323 aaPredicted RBP17.55■□□□□ 0.4
NUP50-213ENST00000461437 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 TMEM150BA6NC51 233 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 PFKFB2O60825 505 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 GAS7O60861 476 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 C22orf31O95567 290 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 VTNP04004 478 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 GATMP50440 423 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 SLC26A2P50443 739 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 CLCN3P51790 818 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 MRPS5P82675 430 aaKnown RBP17.54■□□□□ 0.4
NUP50-213ENST00000461437 LRCH2Q5VUJ6 765 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
NUP50-213ENST00000461437 KIAA0319LQ8IZA0 1049 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 SLC5A5Q92911 643 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 SH2D3AQ9BRG2 576 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 TEKT3Q9BXF9 490 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 TMX1Q9H3N1 280 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 DISC1Q9NRI5 854 aa17.54■□□□□ 0.4
NUP50-213ENST00000461437 NOC2LQ9Y3T9 749 aaKnown RBP17.54■□□□□ 0.4
NUP50-213ENST00000461437 COL1A2P08123 1366 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 PLXNA4Q9HCM2 1894 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 FAM205CA6NFA0 338 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 SLC37A4O43826 429 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 MGEA5O60502 916 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 USP11P51784 963 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
NUP50-213ENST00000461437 PAK2Q13177 524 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 ME3Q16798 604 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 KIZQ2M2Z5 673 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
NUP50-213ENST00000461437 ZNF484Q5JVG2 852 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 ERICH6BQ5W0A0 696 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 TMEM192Q8IY95 271 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 SMAP1Q8IYB5 467 aaPredicted RBP17.53■□□□□ 0.4
NUP50-213ENST00000461437 LRRC71Q8N4P6 559 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 METTL13Q8N6R0 699 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 DAGLBQ8NCG7 672 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
NUP50-213ENST00000461437 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
NUP50-213ENST00000461437 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 OSMRQ99650 979 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
NUP50-213ENST00000461437 ADGRA3Q8IWK6 1321 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 WDR64B1ANS9 1081 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 LINC00271P0C7V0 271 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 PRKCEQ02156 737 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 GPM6BQ13491 265 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 NONOQ15233 471 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP50-213ENST00000461437 LETM2Q2VYF4 491 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 Q4G0T1 1027 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 PAN2Q504Q3 1202 aaKnown RBP17.52■□□□□ 0.4
NUP50-213ENST00000461437 FIBCD1Q8N539 461 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 ADAMTS19Q8TE59 1207 aa17.52■□□□□ 0.4
NUP50-213ENST00000461437 TSPYL2Q9H2G4 693 aaPredicted RBP17.52■□□□□ 0.4
NUP50-213ENST00000461437 RC3H2Q9HBD1 1191 aaKnown RBP17.52■□□□□ 0.4
NUP50-213ENST00000461437 PSMD10O75832 226 aa17.51■□□□□ 0.39
NUP50-213ENST00000461437 OATP04181 439 aa17.51■□□□□ 0.39
NUP50-213ENST00000461437 FDPSP14324 419 aaKnown RBP17.51■□□□□ 0.39
NUP50-213ENST00000461437 CTNNB1P35222 781 aa17.51■□□□□ 0.39
NUP50-213ENST00000461437 ANAPC15P60006 121 aa17.51■□□□□ 0.39
NUP50-213ENST00000461437 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
NUP50-213ENST00000461437 ERVK-5Q9HDB9 667 aa17.51■□□□□ 0.39
NUP50-213ENST00000461437 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
NUP50-213ENST00000461437 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
NUP50-213ENST00000461437 STK36Q9NRP7 1315 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 KDM3AQ9Y4C1 1321 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 NCOR1O75376 2440 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 ARID2Q68CP9 1835 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 JAK2O60674 1132 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 RPS6KA5O75582 802 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 CDKL5O76039 1030 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 ST3GAL1Q11201 340 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 BTG3Q14201 252 aaPredicted RBP17.5■□□□□ 0.39
NUP50-213ENST00000461437 EFCAB12Q6NXP0 572 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 FAM228AQ86W67 206 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 NME8Q8N427 588 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 ETNPPLQ8TBG4 499 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 RIT2Q99578 217 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 ST3GAL5Q9UNP4 418 aa17.5■□□□□ 0.39
NUP50-213ENST00000461437 CYP3A7-CYP3A51PA0A087WV96 503 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 CCDC194A0A1B0GVG4 234 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 H3BNC9 293 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 EML1O00423 815 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 GPR32O75388 356 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 DGKIO75912 1065 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 CENPBP07199 599 aaPredicted RBP17.49■□□□□ 0.39
NUP50-213ENST00000461437 BMP1P13497 986 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 CYP3A7P24462 503 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 NEK4P51957 841 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 NR5A1Q13285 461 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 DRP2Q13474 957 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 KRT25Q7Z3Z0 450 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 LINC01465Q8N7H1 131 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 BANK1Q8NDB2 785 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms