RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PDE1AP54750 535 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 TKFCQ3LXA3 575 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 AXDND1Q5T1B0 1012 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 DZIP1Q86YF9 867 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 ZFPM1Q8IX07 1006 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 FAM46AQ96IP4 442 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 CEP41Q9BYV8 373 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 KLHL25Q9H0H3 589 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 DEFB129Q9H1M3 183 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 SEMA6CQ9H3T2 930 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 VEZTQ9HBM0 779 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 DDX4Q9NQI0 724 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 PAG1Q9NWQ8 432 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 MYH2Q9UKX2 1941 aa9.64□□□□□ -0.87
ECHDC1-212ENST00000461239 ECM29Q5VYK3 1845 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 TCP10L2B9ZVM9 353 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 WDHD1O75717 1129 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 CELF2O95319 508 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 EPHX1P07099 455 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 COL8A1P27658 744 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 DYNLL1P63167 89 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 LONRF2Q1L5Z9 754 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 NBPF12Q5TAG4 269 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 NAA16Q6N069 864 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 MOB2Q70IA6 237 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 SKAP1Q86WV1 359 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 ANKRD13AQ8IZ07 590 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 LRRC47Q8N1G4 583 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 DNAJC5GQ8N7S2 189 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 VWCEQ96DN2 955 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 SGSM3Q96HU1 749 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 PSMG3-AS1Q96PY0 264 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 UBL7Q96S82 380 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 FEZ1Q99689 392 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 TMEM39BQ9GZU3 492 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 USP40Q9NVE5 1235 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 FZD1Q9UP38 647 aa9.63□□□□□ -0.87
ECHDC1-212ENST00000461239 ANKRD34BA5PLL1 514 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 MYO1BO43795 1136 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 GLB1P16278 677 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 PDE6AP16499 860 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 CYP7A1P22680 504 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 NOS3P29474 1203 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 TMEM67Q5HYA8 995 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 FKBP1CQ5VVH2 108 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 DCAF15Q66K64 600 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 BEND7Q8N7W2 519 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 ZNF513Q8N8E2 541 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 ZSWIM2Q8NEG5 633 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 SH3RF3Q8TEJ3 882 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 EZH1Q92800 747 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 RIOK1Q9BRS2 568 aaKnown RBP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 IDI2Q9BXS1 227 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 AATFQ9NY61 560 aaKnown RBP eCLIP9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 CEP131Q9UPN4 1083 aa9.62□□□□□ -0.87
ECHDC1-212ENST00000461239 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 MAST2Q6P0Q8 1798 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 SHOXO15266 292 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 GAS2O43903 313 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 GLRX3O76003 335 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 LDHCP07864 332 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 ADD2P35612 726 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 USP11P51784 963 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 GSTO1P78417 241 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 MAP3K12Q12852 859 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 TTF1Q15361 905 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 RNF187Q5TA31 235 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 SLC9C2Q5TAH2 1124 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 SAPCD2Q86UD0 394 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 FAM83AQ86UY5 434 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 RIN3Q8TB24 985 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 WFDC12Q8WWY7 111 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 MIPEPQ99797 713 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 APEX2Q9UBZ4 518 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 TRPM7Q96QT4 1865 aa9.61□□□□□ -0.87
ECHDC1-212ENST00000461239 A0A1W2PQU0 124 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 DDTLA6NHG4 134 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 C9orf172C9J069 976 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 DYNC1LI2O43237 492 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 SLITRK5O94991 958 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 NFICP08651 508 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 NAT2P11245 290 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 RGS3P49796 1198 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 GYS2P54840 703 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 NRG1Q02297 640 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 TCP10Q12799 353 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 PTPROQ16827 1216 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 SV2CQ496J9 727 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 SGO2Q562F6 1265 aa9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 HEATR6Q6AI08 1181 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-212ENST00000461239 LETMD1Q6P1Q0 360 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms