RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 PKN1Q16512 942 aa16.71■□□□□ 0.27
SMPD4-216ENST00000461187 PDXDC2PQ6P474 469 aa16.71■□□□□ 0.27
SMPD4-216ENST00000461187 KIAA0319LQ8IZA0 1049 aa16.71■□□□□ 0.27
SMPD4-216ENST00000461187 CDHR5Q9HBB8 845 aa16.71■□□□□ 0.27
SMPD4-216ENST00000461187 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
SMPD4-216ENST00000461187 ZNF302Q9NR11 478 aa16.71■□□□□ 0.27
SMPD4-216ENST00000461187 PRPF3O43395 683 aaKnown RBP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 MGEA5O60502 916 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 ITGB1P05556 798 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 DNAJB1P25685 340 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 GATMP50440 423 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 DLX2Q07687 328 aaPredicted RBP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 NFX1Q12986 1120 aaKnown RBP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 PAN2Q504Q3 1202 aaKnown RBP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 NAALADL2Q58DX5 795 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 ZNF484Q5JVG2 852 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 SWSAP1Q6NVH7 229 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 MIS18BP1Q6P0N0 1132 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 TMEM40Q8WWA1 233 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 BRF1Q92994 677 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 FAM122AQ96E09 287 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 FAM50BQ9Y247 325 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 NOC2LQ9Y3T9 749 aaKnown RBP16.7■□□□□ 0.26
SMPD4-216ENST00000461187 SNX14Q9Y5W7 946 aa16.7■□□□□ 0.26
SMPD4-216ENST00000461187 MYO10Q9HD67 2058 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 CSPG5O95196 566 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 HSPA4P34932 840 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
SMPD4-216ENST00000461187 ZP2Q05996 745 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 ZNF746Q6NUN9 644 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-216ENST00000461187 REXO1Q8N1G1 1221 aaKnown RBP16.69■□□□□ 0.26
SMPD4-216ENST00000461187 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 SPPL3Q8TCT6 385 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 CCDC12Q8WUD4 166 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-216ENST00000461187 C6orf50Q9HD87 102 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 TBC1D22BQ9NU19 505 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 PRKAG3Q9UGI9 489 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 LRFN2Q9ULH4 789 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 GINS2Q9Y248 185 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 HCN4Q9Y3Q4 1203 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-216ENST00000461187 MAFBQ9Y5Q3 323 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-216ENST00000461187 TECTAO75443 2155 aa16.69■□□□□ 0.26
SMPD4-216ENST00000461187 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 LINC01565O15544 149 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 TBX10O75333 385 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 C22orf31O95567 290 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 SETQ01105 290 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-216ENST00000461187 NTRK3Q16288 839 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 BLOC1S2Q6QNY1 142 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-216ENST00000461187 BBXQ8WY36 941 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-216ENST00000461187 PHKBQ93100 1093 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 AGXT2Q9BYV1 514 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 ST3GAL5Q9UNP4 418 aa16.68■□□□□ 0.26
SMPD4-216ENST00000461187 MBTPS2O43462 519 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 EDIL3O43854 480 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 ALADP13716 330 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 GNA11P29992 359 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 CIITAP33076 1130 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 IRS1P35568 1242 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 ADAM15Q13444 863 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 SMAD2Q15796 467 aaKnown RBP16.67■□□□□ 0.26
SMPD4-216ENST00000461187 CLUL1Q15846 466 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 ADGRD2Q7Z7M1 963 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 ADHFE1Q8IWW8 467 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
SMPD4-216ENST00000461187 RASGRP4Q8TDF6 673 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 LENG9Q96B70 501 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 ADAM2Q99965 735 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 RGS18Q9NS28 235 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 PCDHB7Q9Y5E2 793 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 PCDHA10Q9Y5I2 948 aa16.67■□□□□ 0.26
SMPD4-216ENST00000461187 C9IYK1 514 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 GPR32O75388 356 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 PSAPP07602 524 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 IBSPP21815 317 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-216ENST00000461187 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 CRYBB1P53674 252 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-216ENST00000461187 KIZQ2M2Z5 673 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 PRR16Q569H4 304 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 ODR4Q5SWX8 454 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 SLC24A5Q71RS6 500 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 FAM228AQ86W67 206 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 PPP1R16BQ96T49 567 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 OSMRQ99650 979 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 GABBR1Q9UBS5 961 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 WDFY4Q6ZS81 3184 aa16.66■□□□□ 0.26
SMPD4-216ENST00000461187 DENND3A2RUS2 1198 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms