RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ZNF274Q96GC6 653 aaPredicted RBP25.8■■□□□ 1.72
PTPN4-207ENST00000460162 UIMC1Q96RL1 719 aa25.8■■□□□ 1.72
PTPN4-207ENST00000460162 CEP131Q9UPN4 1083 aa25.8■■□□□ 1.72
PTPN4-207ENST00000460162 PCDHA10Q9Y5I2 948 aa25.8■■□□□ 1.72
PTPN4-207ENST00000460162 ATP4AP20648 1035 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 BMPR1AP36894 532 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 CMTR2Q8IYT2 770 aaKnown RBP25.79■■□□□ 1.72
PTPN4-207ENST00000460162 KIAA0319LQ8IZA0 1049 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 FAM177A1Q8N128 213 aaPredicted RBP25.79■■□□□ 1.72
PTPN4-207ENST00000460162 CRIPAKQ8N1N5 446 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 BANK1Q8NDB2 785 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 FAM167AQ96KS9 214 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 C22orf23Q9BZE7 217 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 LMAN2LQ9H0V9 348 aa25.79■■□□□ 1.72
PTPN4-207ENST00000460162 WDR64B1ANS9 1081 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 CPLX1O14810 134 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 DEXIO95424 95 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 C22orf31O95567 290 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 STAG3L1P0CL83 205 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 USP11P51784 963 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 NLRP5P59047 1200 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 SSRP1Q08945 709 aaKnown RBP25.78■■□□□ 1.72
PTPN4-207ENST00000460162 LEXMQ3ZCV2 418 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 ODR4Q5SWX8 454 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 RTN4RL1Q86UN2 441 aaPredicted RBP25.78■■□□□ 1.72
PTPN4-207ENST00000460162 NSUN3Q9H649 340 aaKnown RBP25.78■■□□□ 1.72
PTPN4-207ENST00000460162 SAMM50Q9Y512 469 aa25.78■■□□□ 1.72
PTPN4-207ENST00000460162 KCNA5P22460 613 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 CPLX2Q6PUV4 134 aaKnown RBP25.77■■□□□ 1.72
PTPN4-207ENST00000460162 RIT2Q99578 217 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 PLVAPQ9BX97 442 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 UPF3BQ9BZI7 483 aaKnown RBP25.77■■□□□ 1.72
PTPN4-207ENST00000460162 TMX1Q9H3N1 280 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 ERVK-5Q9HDB9 667 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 GABBR1Q9UBS5 961 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 PCDHA4Q9UN74 947 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 GINS2Q9Y248 185 aa25.77■■□□□ 1.72
PTPN4-207ENST00000460162 MSH4O15457 936 aa25.76■■□□□ 1.71
PTPN4-207ENST00000460162 RPS6KA5O75582 802 aa25.76■■□□□ 1.71
PTPN4-207ENST00000460162 TMEM266Q2M3C6 531 aa25.76■■□□□ 1.71
PTPN4-207ENST00000460162 EDIL3O43854 480 aa25.75■■□□□ 1.71
PTPN4-207ENST00000460162 NFX1Q12986 1120 aaKnown RBP25.75■■□□□ 1.71
PTPN4-207ENST00000460162 COL19A1Q14993 1142 aa25.75■■□□□ 1.71
PTPN4-207ENST00000460162 TCEAL5Q5H9L2 206 aa25.75■■□□□ 1.71
PTPN4-207ENST00000460162 DAGLBQ8NCG7 672 aa25.75■■□□□ 1.71
PTPN4-207ENST00000460162 TMEM40Q8WWA1 233 aa25.75■■□□□ 1.71
PTPN4-207ENST00000460162 DISC1Q9NRI5 854 aa25.75■■□□□ 1.71
PTPN4-207ENST00000460162 NOC2LQ9Y3T9 749 aaKnown RBP25.75■■□□□ 1.71
PTPN4-207ENST00000460162 MAGEB2O15479 319 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 GAS7O60861 476 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 SFNP31947 248 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 SARSP49591 514 aaKnown RBP25.74■■□□□ 1.71
PTPN4-207ENST00000460162 JAK3P52333 1124 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 GALNT17Q6IS24 598 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 TBCKQ8TEA7 893 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 SLC5A5Q92911 643 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 P2RX5Q93086 422 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 PABPC5Q96DU9 382 aaKnown RBP25.74■■□□□ 1.71
PTPN4-207ENST00000460162 TEKT3Q9BXF9 490 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 C1orf112Q9NSG2 853 aa25.74■■□□□ 1.71
PTPN4-207ENST00000460162 RNF216Q9NWF9 866 aaPredicted RBP25.74■■□□□ 1.71
PTPN4-207ENST00000460162 MRPL42Q9Y6G3 142 aaKnown RBP25.74■■□□□ 1.71
PTPN4-207ENST00000460162 FNDC1Q4ZHG4 1894 aaPredicted RBP25.74■■□□□ 1.71
PTPN4-207ENST00000460162 GPR182O15218 404 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 GRM6O15303 877 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 MMP1P03956 469 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 OATP04181 439 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 CRYBB1P53674 252 aaPredicted RBP25.73■■□□□ 1.71
PTPN4-207ENST00000460162 LRCH2Q5VUJ6 765 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 BLIDQ8IZY5 108 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 METTL13Q8N6R0 699 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 NEK9Q8TD19 979 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 PDRG1Q9NUG6 133 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 LRFN2Q9ULH4 789 aa25.73■■□□□ 1.71
PTPN4-207ENST00000460162 M0R2N6 131 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 PRKCEQ02156 737 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 KIZQ2M2Z5 673 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 PUS10Q3MIT2 529 aaKnown RBP25.72■■□□□ 1.71
PTPN4-207ENST00000460162 Q4G0T1 1027 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 NAALADL2Q58DX5 795 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 MOXD1Q6UVY6 613 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 TRMT1LQ7Z2T5 733 aaKnown RBP25.72■■□□□ 1.71
PTPN4-207ENST00000460162 RDM1Q8NG50 284 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.72■■□□□ 1.71
PTPN4-207ENST00000460162 MAP7D2Q96T17 732 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 OSMRQ99650 979 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 CDHR5Q9HBB8 845 aa25.72■■□□□ 1.71
PTPN4-207ENST00000460162 MYO7AQ13402 2215 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 DENND3A2RUS2 1198 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 CHMP2AO43633 222 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 NCK2O43639 380 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 ZNF862O60290 1169 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 MGEA5O60502 916 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 CDKL5O76039 1030 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 STK3Q13188 491 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 NPY5RQ15761 445 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 ZNF710Q8N1W2 664 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 LINC01465Q8N7H1 131 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 C1QTNF1Q9BXJ1 281 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 UNC45AQ9H3U1 944 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms