RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PAK2Q13177 524 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDLBP-228ENST00000459788 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 KIAA0319LQ8IZA0 1049 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 CRIPAKQ8N1N5 446 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 TBCKQ8TEA7 893 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 CLP1Q92989 425 aaKnown RBP11.31□□□□□ -0.6
HDLBP-228ENST00000459788 ZNF689Q96CS4 500 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-228ENST00000459788 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 PLVAPQ9BX97 442 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 TEKT3Q9BXF9 490 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 DISC1Q9NRI5 854 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 PPME1Q9Y570 386 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 DDX39AO00148 427 aaKnown RBP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 TBX3O15119 743 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 GPR182O15218 404 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 NCK2O43639 380 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 EDIL3O43854 480 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 DKC1O60832 514 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 PSMD10O75832 226 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 C22orf31O95567 290 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 ATP4AP20648 1035 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 TMOD1P28289 359 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 CRYBB1P53674 252 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 SCRN1Q12765 414 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 NPY5RQ15761 445 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 EPC2Q52LR7 807 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 TIGD5Q53EQ6 642 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 LRCH2Q5VUJ6 765 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 PPP4R3AQ6IN85 833 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 NPAS4Q8IUM7 802 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 TMEM192Q8IY95 271 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 CMTR2Q8IYT2 770 aaKnown RBP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 FIBCD1Q8N539 461 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 MRPL38Q96DV4 380 aaKnown RBP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 FAM20AQ96MK3 541 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 AGO3Q9H9G7 860 aaKnown RBP11.3□□□□□ -0.6
HDLBP-228ENST00000459788 C1orf112Q9NSG2 853 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 PADI3Q9ULW8 664 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 ADGRA3Q8IWK6 1321 aa11.3□□□□□ -0.6
HDLBP-228ENST00000459788 CCDC194A0A1B0GVG4 234 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 RFXAPO00287 272 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 DGKIO75912 1065 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 OATP04181 439 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 CD52P31358 61 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 CCDC85BQ15834 202 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-228ENST00000459788 TMCO2Q7Z6W1 182 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-228ENST00000459788 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 EXOC8Q8IYI6 725 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 LINC01465Q8N7H1 131 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 TRAPPC12Q8WVT3 735 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 P2RX5Q93086 422 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 HLA-CQ95604 372 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 C11orf84Q9BUA3 381 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-228ENST00000459788 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
HDLBP-228ENST00000459788 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 CERS4Q9HA82 394 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 GABBR1Q9UBS5 961 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 TPCN1Q9ULQ1 816 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 SAMM50Q9Y512 469 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 MUC3AQ02505 3323 aa11.29□□□□□ -0.6
HDLBP-228ENST00000459788 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 RPS6KA5O75582 802 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 UPP2O95045 317 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 BMPR1AP36894 532 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 SARSP49591 514 aaKnown RBP11.28□□□□□ -0.6
HDLBP-228ENST00000459788 AK2P54819 239 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 STK3Q13188 491 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 XKR3Q5GH77 459 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 NEK8Q86SG6 692 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 GDPD5Q8WTR4 605 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 GTF3C6Q969F1 213 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 JPH2Q9BR39 696 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-228ENST00000459788 C17orf80Q9BSJ5 609 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 ELAC1Q9H777 363 aaKnown RBP11.28□□□□□ -0.6
HDLBP-228ENST00000459788 BRMS1Q9HCU9 246 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 KCNMB3Q9NPA1 279 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 RGS18Q9NS28 235 aa11.28□□□□□ -0.6
HDLBP-228ENST00000459788 DDX25Q9UHL0 483 aaKnown RBP11.28□□□□□ -0.6
HDLBP-228ENST00000459788 XIRP2A4UGR9 3374 aa11.27□□□□□ -0.6
HDLBP-228ENST00000459788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-228ENST00000459788 TNFRSF10AO00220 468 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 ZNF862O60290 1169 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 GPR32O75388 356 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 BMP1P13497 986 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 PRKCEQ02156 737 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 GPM6BQ13491 265 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms