RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PAXIP1Q6ZW49 1069 aaPredicted RBP27.02■■□□□ 1.92
U2AF1-204ENST00000459639 MSL3Q8N5Y2 521 aaKnown RBP27.02■■□□□ 1.92
U2AF1-204ENST00000459639 MYCT1Q8N699 235 aa27.02■■□□□ 1.92
U2AF1-204ENST00000459639 SRRTQ9BXP5 876 aaKnown RBP27.02■■□□□ 1.92
U2AF1-204ENST00000459639 MRPL44Q9H9J2 332 aaKnown RBP27.02■■□□□ 1.92
U2AF1-204ENST00000459639 LIMA1Q9UHB6 759 aaKnown RBP27.02■■□□□ 1.92
U2AF1-204ENST00000459639 DOCK3Q8IZD9 2030 aa27.02■■□□□ 1.92
U2AF1-204ENST00000459639 RBM47A0AV96 593 aaKnown RBP27.01■■□□□ 1.92
U2AF1-204ENST00000459639 TMEM150BA6NC51 233 aa27.01■■□□□ 1.92
U2AF1-204ENST00000459639 TXNP10599 105 aaKnown RBP27.01■■□□□ 1.92
U2AF1-204ENST00000459639 CRHR2Q13324 411 aa27.01■■□□□ 1.92
U2AF1-204ENST00000459639 BMT2Q1RMZ1 405 aa27.01■■□□□ 1.92
U2AF1-204ENST00000459639 FAM160B1Q5W0V3 765 aa27.01■■□□□ 1.92
U2AF1-204ENST00000459639 APTXQ7Z2E3 356 aaKnown RBP27.01■■□□□ 1.92
U2AF1-204ENST00000459639 AFAP1L1Q8TED9 768 aa27.01■■□□□ 1.92
U2AF1-204ENST00000459639 NAP1L5Q96NT1 182 aaPredicted RBP27.01■■□□□ 1.92
U2AF1-204ENST00000459639 KATNBL1Q9H079 304 aa27.01■■□□□ 1.92
U2AF1-204ENST00000459639 KCNJ18B7U540 433 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 EEF1GP26641 437 aaKnown RBP27.01■■□□□ 1.91
U2AF1-204ENST00000459639 CASP5P51878 434 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 KCNJ12Q14500 433 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 ZCWPW2Q504Y3 356 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 TCP11X2Q5H9J9 407 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 CYP4F22Q6NT55 531 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 TAPT1Q6NXT6 567 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 IRF2BP1Q8IU81 584 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 FAM114A1Q8IWE2 563 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 DHX37Q8IY37 1157 aaKnown RBP27.01■■□□□ 1.91
U2AF1-204ENST00000459639 DAW1Q8N136 415 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 PDGFCQ9NRA1 345 aa27.01■■□□□ 1.91
U2AF1-204ENST00000459639 SEPT9Q9UHD8 586 aaPredicted RBP27.01■■□□□ 1.91
U2AF1-204ENST00000459639 A0A1B0GTH6 734 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 SFI1A8K8P3 1242 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 EIF3DO15371 548 aaKnown RBP eCLIP27■■□□□ 1.91
U2AF1-204ENST00000459639 FGFR1OPO95684 399 aaKnown RBP27■■□□□ 1.91
U2AF1-204ENST00000459639 NPEPPSP55786 919 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 MAP2K5Q13163 448 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 NPLOC4Q8TAT6 608 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 CEP170P1Q96L14 293 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 DRC1Q96MC2 740 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 ZIC5Q96T25 663 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 GPR20Q99678 358 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 TINF2Q9BSI4 451 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 UBE4BO95155 1302 aa27■■□□□ 1.91
U2AF1-204ENST00000459639 CA12O43570 354 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 SNAI1O95863 264 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-204ENST00000459639 OATP04181 439 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 TCF7P36402 384 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-204ENST00000459639 NOGQ13253 232 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 PPP4R3CPQ6ZMV5 832 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 STXBP4Q6ZWJ1 553 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 FIZ1Q96SL8 496 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 PCYT2Q99447 389 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 KCTD10Q9H3F6 313 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 POLD4Q9HCU8 107 aa26.99■■□□□ 1.91
U2AF1-204ENST00000459639 LARSQ9P2J5 1176 aaKnown RBP26.99■■□□□ 1.91
U2AF1-204ENST00000459639 MAGEC2Q9UBF1 373 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-204ENST00000459639 LRRC10BA6NIK2 292 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 NOP56O00567 594 aaKnown RBP26.98■■□□□ 1.91
U2AF1-204ENST00000459639 GCNT3O95395 438 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 ALDH1A1P00352 501 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 HOXC6P09630 235 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 MYBP10242 640 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 KRT31Q15323 416 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 ODR4Q5SWX8 454 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 FAM178BQ8IXR5 827 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 ZNF507Q8TCN5 953 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 CYP26B1Q9NR63 512 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 INTS13Q9NVM9 706 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 LGR5O75473 907 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 MAPTP10636 758 aaKnown RBP26.98■■□□□ 1.91
U2AF1-204ENST00000459639 ATP4AP20648 1035 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 KNOP1Q1ED39 458 aaKnown RBP26.98■■□□□ 1.91
U2AF1-204ENST00000459639 FILIP1LQ4L180 1135 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 TRMT1LQ7Z2T5 733 aaKnown RBP26.98■■□□□ 1.91
U2AF1-204ENST00000459639 NELFCDQ8IXH7 590 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 SPATA33Q96N06 139 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 SH2D3AQ9BRG2 576 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 ABHD16BQ9H3Z7 469 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 IMPACTQ9P2X3 320 aa26.98■■□□□ 1.91
U2AF1-204ENST00000459639 EMSYQ7Z589 1322 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 DGAT1O75907 488 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 STAT5BP51692 787 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 GRM1Q13255 1194 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 NR1I3Q14994 352 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 HSDL1Q3SXM5 330 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 AZI2Q9H6S1 392 aa26.97■■□□□ 1.91
U2AF1-204ENST00000459639 RASSF10A6NK89 507 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 PLS3P13797 630 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 IRF5Q13568 498 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 EDRF1Q3B7T1 1238 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 LRRC55Q6ZSA7 311 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 ZNF720Q7Z2F6 126 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 VSTM4Q8IW00 320 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 SOCS4Q8WXH5 440 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 USP6NLQ92738 828 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 COPS5Q92905 334 aa26.96■■□□□ 1.91
U2AF1-204ENST00000459639 NIFKQ9BYG3 293 aaKnown RBP26.96■■□□□ 1.91
U2AF1-204ENST00000459639 PRPF6O94906 941 aaKnown RBP26.95■■□□□ 1.91
U2AF1-204ENST00000459639 GH1P01241 217 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms