RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PCDHB7Q9Y5E2 793 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 KIAA1671Q9BY89 1806 aa24.47■■□□□ 1.51
CPNE1-220ENST00000458038 GPR182O15218 404 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 MBTPS2O43462 519 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 RPS6KA5O75582 802 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 SETQ01105 290 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-220ENST00000458038 NFX1Q12986 1120 aaKnown RBP24.46■■□□□ 1.51
CPNE1-220ENST00000458038 CAMK1Q14012 370 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 RASEFQ8IZ41 740 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 KIAA0319LQ8IZA0 1049 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 KLHL23Q8NBE8 558 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 CRYGNQ8WXF5 182 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 TCEANC2Q96MN5 208 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 TMX1Q9H3N1 280 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 IGFLR1Q9H665 355 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 AAASQ9NRG9 546 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 TCEAL9Q9UHQ7 104 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 CD207Q9UJ71 328 aa24.46■■□□□ 1.51
CPNE1-220ENST00000458038 FAM86B1E9PN63 330 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 DHX15O43143 795 aaKnown RBP24.45■■□□□ 1.5
CPNE1-220ENST00000458038 FAM86B2P0C5J1 330 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 CDC27P30260 824 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 ADCK5Q3MIX3 580 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 ZNF746Q6NUN9 644 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-220ENST00000458038 SWSAP1Q6NVH7 229 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 CENPQQ7L2Z9 268 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-220ENST00000458038 CCDC60Q8IWA6 550 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-220ENST00000458038 SMAP1Q8IYB5 467 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-220ENST00000458038 ZNF710Q8N1W2 664 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 BBXQ8WY36 941 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-220ENST00000458038 ZMYND12Q9H0C1 365 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 C6orf50Q9HD87 102 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 ERVK-5Q9HDB9 667 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 PCDHB12Q9Y5F1 795 aa24.45■■□□□ 1.5
CPNE1-220ENST00000458038 IGLV3-22A0A075B6J6 115 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 FSD2A1L4K1 749 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 DENND3A2RUS2 1198 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 DDX39AO00148 427 aaKnown RBP24.44■■□□□ 1.5
CPNE1-220ENST00000458038 GNA11P29992 359 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 METAP2P50579 478 aaKnown RBP eCLIP24.44■■□□□ 1.5
CPNE1-220ENST00000458038 UBE3AQ05086 875 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 DLX2Q07687 328 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-220ENST00000458038 PAN2Q504Q3 1202 aaKnown RBP24.44■■□□□ 1.5
CPNE1-220ENST00000458038 JAKMIP3Q5VZ66 844 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 SLC24A5Q71RS6 500 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 EFHBQ8N7U6 833 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 ZNF577Q9BSK1 485 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 RGS18Q9NS28 235 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 GINS2Q9Y248 185 aa24.44■■□□□ 1.5
CPNE1-220ENST00000458038 FNDC1Q4ZHG4 1894 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-220ENST00000458038 CDC45O75419 566 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 EYA4O95677 639 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 CRYBB1P53674 252 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-220ENST00000458038 TMEM266Q2M3C6 531 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 CKAP2LQ8IYA6 745 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 REXO1Q8N1G1 1221 aaKnown RBP24.43■■□□□ 1.5
CPNE1-220ENST00000458038 POF1BQ8WVV4 589 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 ADAM2Q99965 735 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 KCNH6Q9H252 994 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 NAP1L2Q9ULW6 460 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-220ENST00000458038 ST3GAL5Q9UNP4 418 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 CEP131Q9UPN4 1083 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 NOC2LQ9Y3T9 749 aaKnown RBP24.43■■□□□ 1.5
CPNE1-220ENST00000458038 PCDHA10Q9Y5I2 948 aa24.43■■□□□ 1.5
CPNE1-220ENST00000458038 MAFBQ9Y5Q3 323 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-220ENST00000458038 ZBTB42B2RXF5 422 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 TBX10O75333 385 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 DNAJB1P25685 340 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 IRS1P35568 1242 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 ADD1P35611 737 aaKnown RBP24.42■■□□□ 1.5
CPNE1-220ENST00000458038 NDUFV1P49821 464 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 BICD2Q8TD16 824 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 MSLNLQ96KJ4 702 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 UIMC1Q96RL1 719 aa24.42■■□□□ 1.5
CPNE1-220ENST00000458038 MAGEB2O15479 319 aa24.41■■□□□ 1.5
CPNE1-220ENST00000458038 PSAPP07602 524 aa24.41■■□□□ 1.5
CPNE1-220ENST00000458038 GTF2F1P35269 517 aaKnown RBP eCLIP24.41■■□□□ 1.56e-10■■■□□ 14.7
CPNE1-220ENST00000458038 CLUL1Q15846 466 aa24.41■■□□□ 1.5
CPNE1-220ENST00000458038 PDE12Q6L8Q7 609 aaKnown RBP24.41■■□□□ 1.5
CPNE1-220ENST00000458038 FBXL16Q8N461 479 aa24.41■■□□□ 1.5
CPNE1-220ENST00000458038 FAM167AQ96KS9 214 aa24.41■■□□□ 1.5
CPNE1-220ENST00000458038 ELAC1Q9H777 363 aaKnown RBP24.41■■□□□ 1.5
CPNE1-220ENST00000458038 WDR81Q562E7 1941 aa24.41■■□□□ 1.5
CPNE1-220ENST00000458038 C9IYK1 514 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 PRPF3O43395 683 aaKnown RBP24.4■■□□□ 1.5
CPNE1-220ENST00000458038 C22orf31O95567 290 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 ATP4AP20648 1035 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 CIITAP33076 1130 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 AKAP17AQ02040 695 aaKnown RBP24.4■■□□□ 1.5
CPNE1-220ENST00000458038 COASYQ13057 564 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 HERC4Q5GLZ8 1057 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-220ENST00000458038 SPOUT1Q5T280 376 aaKnown RBP24.4■■□□□ 1.5
CPNE1-220ENST00000458038 KCNB2Q92953 911 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 CDHR5Q9HBB8 845 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 TMEM161AQ9NX61 479 aa24.4■■□□□ 1.5
CPNE1-220ENST00000458038 PLXNA4Q9HCM2 1894 aa24.39■■□□□ 1.5
CPNE1-220ENST00000458038 TBKBP1A7MCY6 615 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 LINC01565O15544 149 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 MGEA5O60502 916 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 FAM189BP81408 668 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms